EY710232

Overview
NameEY710232
Unique NameEY710232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.938e-34
Identity = 64/104 (61.54%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYDRP*N-LCILNEYIGKGIVGIQGPFYQGTGNF 306
            ++P +  HYK GAMN L RVSGLMTNAP+ LNVDCDMYAN P++V QAMC+ L  SKN N  AF+Q PQ FYD   N L +L   +G+G+ GIQGPFY GTG F
Sbjct:  261 KRPNYLHHYKTGAMNFLLRVSGLMTNAPYTLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQKFYDSYTNELAVLQSILGRGVAGIQGPFYIGTGCF 364          

HSP 2 Score: 38.1206 bits (87), Expect = 1.938e-34
Identity = 19/48 (39.58%), Postives = 27/48 (56.25%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGNI---------VKNEQPKKFGNSKKFIKS 421
            FH R V+YGL  D +E  GNI          ++   +K+GNSK+ +KS
Sbjct:  364 FHTRRVMYGLSSDDLEDNGNISQVATREFLAEDSLVRKYGNSKELVKS 411          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 3.819e-32
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYDRP*N-LCILNEYIGKGIVGIQGPFYQGTGNF 306
            ++P +  HYK GAMN L RVSGLMTNAP+MLNVDCDMYAN P++V QAMC+ L  SKN N  AF+Q PQ FYD   N L +L  Y+ +G+ GIQGP Y G+G F
Sbjct:  261 KRPNYLHHYKTGAMNFLLRVSGLMTNAPYMLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQNFYDSYTNELVVLQHYMKRGVAGIQGPIYIGSGCF 364          

HSP 2 Score: 32.7278 bits (73), Expect = 3.819e-32
Identity = 16/48 (33.33%), Postives = 27/48 (56.25%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGN---------IVKNEQPKKFGNSKKFIKS 421
            FH R V+YGL  D +E  G+         + ++   +K+G+SK+ +KS
Sbjct:  364 FHTRRVMYGLSSDDLEDDGSLSSVASREFLSEDSLVRKYGSSKELVKS 411          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.098e-31
Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYD-RP*NLCILNEYIGKGIVGIQGPFYQGTGNF 306
            ++P +  HYKAGAMN L RVSGLMTNAP+MLNVDCDMYAN  ++V QAMC+ L  S N N  AF+Q PQ FYD     L +L  Y+G+GI GIQGP Y G+G F
Sbjct:  261 KRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSMNSNHCAFVQFPQEFYDSNADELTVLQSYLGRGIAGIQGPTYAGSGCF 364          

HSP 2 Score: 32.3426 bits (72), Expect = 1.098e-31
Identity = 15/48 (31.25%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGN---------IVKNEQPKKFGNSKKFIKS 421
            FH R V+YGL +D +E  G+         + +    ++FGNS + + S
Sbjct:  364 FHTRRVMYGLSIDDLEDDGSLSSLATRKYLAEENLAREFGNSNEMVTS 411          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.158e-31
Identity = 62/104 (59.62%), Postives = 74/104 (71.15%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYD-RP*NLCILNEYIGKGIVGIQGPFYQGTGNF 306
            ++P H  HYKAGAMN L RVSGLMTNAP+MLNVDCDMY N  ++V QAMC+ L  S + N  AF+Q PQ FYD     L +L  Y+G+GI GIQGP Y G+G F
Sbjct:  261 KRPNHFHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYDSNVGELTVLQLYLGRGIAGIQGPQYAGSGCF 364          

HSP 2 Score: 34.6538 bits (78), Expect = 3.158e-31
Identity = 17/48 (35.42%), Postives = 26/48 (54.17%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGN---------IVKNEQPKKFGNSKKFIKS 421
            FH R V+YGL LD +   G+         + +    ++FGNSK+ +KS
Sbjct:  364 FHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREFGNSKEMVKS 411          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.079e-31
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYD-RP*NLCILNEYIGKGIVGIQGPFYQGTGNF 306
            ++P +  HYKAGAMN L RVSGLMTNAP+MLNVDCDMYAN  ++V QAMC+ L  S+N+N  AF+Q PQ FYD     L ++  Y+G+GI GIQGP   G+G F
Sbjct:  261 KRPNYLHHYKAGAMNFLARVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSQNQNHCAFVQFPQEFYDSNTIKLTVIKSYMGRGIAGIQGPINVGSGCF 364          

HSP 2 Score: 31.9574 bits (71), Expect = 9.079e-31
Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGN---------IVKNEQPKKFGNSKKFIKS 421
            FH R V+YGL  D++E  G+         + ++     FGNSK+ + S
Sbjct:  364 FHSRRVMYGLSPDELEDNGSLSSVATRELLAEDSLSSGFGNSKEMVTS 411          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.653e-28
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY----DRP--*NLCILNEYIGKGIVGIQGPFYQGTGNF 306
            + P    HYKAGAMN LTRVS LMTNAPFMLN+DCDM+ NNP +VL AMCL LG  +E   AF+Q+PQ FY    D P    L +    +G+GI G+QG FY GTG F
Sbjct:  262 KSPNLHHHYKAGAMNALTRVSALMTNAPFMLNLDCDMFVNNPRVVLHAMCLLLGFDDEISCAFVQTPQKFYGALKDDPFGNQLEVSLMKVGRGIAGLQGIFYCGTGCF 369          

HSP 2 Score: 30.0314 bits (66), Expect = 6.653e-28
Identity = 15/40 (37.50%), Postives = 21/40 (52.50%), Query Frame = 2
Query:  305 FHKRNVVYGLCLDQIEHQGNIVKNEQPKKFGNSKKFIKSA 424
            FH+R V+YG+   +    G     E   KFG+S  F +SA
Sbjct:  369 FHRRKVIYGMRTGREGTTGYSSNKELHSKFGSSNNFKESA 408          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.049e-26
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYDRP*NL-CILNEYIGKGIVGIQGPFYQGTG 300
            ++P +  + K GAMN L RVSGLMTNAP++LNVDCDMYAN+ ++V QAMC+ L  S N    AF+Q  Q FYD    L  +L  ++G+GI GIQGP Y G+G
Sbjct:  262 KRPNYVHNQKCGAMNFLARVSGLMTNAPYILNVDCDMYANDADVVRQAMCILLQESLNMKHCAFVQFRQEFYDSSTELIVVLQSHLGRGIAGIQGPIYIGSG 363          

HSP 2 Score: 33.8834 bits (76), Expect = 2.049e-26
Identity = 18/47 (38.30%), Postives = 26/47 (55.32%), Query Frame = 2
Query:  308 HKRNVVYGLCLDQIEHQGNI---------VKNEQPKKFGNSKKFIKS 421
            H R V+YGL  D  E  G++         VK+   ++FGNSK+ +KS
Sbjct:  366 HTRRVMYGLSPDDFEVDGSLSSVATREFLVKDSLARRFGNSKEMMKS 412          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.988e-21
Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 1
Query:    1 EKPKHPPHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP*NLCILNEYIGKGI-VGIQGPFYQGTGNF 306
            + P H  HYKAGAMN LTRVS +MTNAP MLNVDCDM+AN+P++VL AMCL LG  +E    F+Q PQ FY       + ++  G  + V  +G FY GTG F
Sbjct:  309 KSPGHHHHYKAGAMNALTRVSAVMTNAPIMLNVDCDMFANDPQVVLHAMCLLLGFDDEISSGFVQVPQSFYGD-----LKDDPFGNKLEVIYKGLFYGGTGCF 406          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.813e-18
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   46 VLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP*N-------LCILNEYIGKGIVGIQGPFYQGTGNFS*TKCCIWSMPRSN*TSRK 363
            V TRVS +MTNAP MLN+DCDM+ NNP+ VL AMCL LG  +E    F+Q+PQ FYD   +        C    +I  G+ G+QG FY GTG F   K      P  N   R+
Sbjct:  284 VKTRVSAVMTNAPIMLNMDCDMFVNNPQAVLHAMCLLLGFDDEASSGFVQAPQRFYDALKDDPFGNQMECFFKRFI-SGVQGVQGAFYAGTGCFHRRKAVYGVPPNFNGAERE 395          
BLAST of EY710232 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.813e-18
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   46 VLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP*N-------LCILNEYIGKGIVGIQGPFYQGTGNFS*TKCCIWSMPRSN*TSRK 363
            V TRVS +MTNAP MLN+DCDM+ NNP+ VL AMCL LG  +E    F+Q+PQ FYD   +        C    +I  G+ G+QG FY GTG F   K      P  N   R+
Sbjct:  284 VKTRVSAVMTNAPIMLNMDCDMFVNNPQAVLHAMCLLLGFDDEASSGFVQAPQRFYDALKDDPFGNQMECFFKRFI-SGVQGVQGAFYAGTGCFHRRKAVYGVPPNFNGAERE 395          
The following BLAST results are available for this feature:
BLAST of EY710232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CSLB5_ARATH1.938e-3461.54Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLB6_ARATH3.819e-3260.58Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB3_ARATH1.098e-3160.58Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB4_ARATH3.158e-3159.62Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB2_ARATH9.079e-3158.65Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLH1_ORYSJ6.653e-2857.41Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLB1_ARATH2.049e-2653.92Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLH3_ORYSJ2.988e-2153.40Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLH2_ORYSJ1.813e-1846.02Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI1.813e-1846.02Cellulose synthase-like protein H2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-091-E01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710232 ID=EY710232; Name=EY710232; organism=Citrus sinensis; type=EST; length=955bp
GAAAAGCCAAAGCATCCCCCTCACTACAAAGCAGGGGCCATGAATGTATT
GACTAGGGTGTCTGGGCTGATGACAAATGCGCCGTTCATGCTTAATGTAG
ACTGCGACATGTATGCCAACAATCCAGAGATTGTTCTTCAAGCTATGTGT
TTGCATCTGGGCTCCAAGAACGAAAACGAATTTGCGTTTATTCAATCTCC
ACAATATTTCTATGACAGACCATAAAATCTGTGCATTTTAAATGAGTATA
TCGGGAAAGGAATTGTGGGAATTCAAGGACCTTTCTATCAAGGTACAGGA
AACTTTTCATAAACGAAATGTTGTATATGGTCTATGCCTCGATCAAATTG
AACATCAAGGAAATATAGTGAAAAATGAACAGCCGAAAAAATTCGGAAAT
TCAAAAAAATTCATCAAATCAGCTGCTTCAGACTTTGGAAAGGAAGACAG
GAAGTTATTCCAGTAAATATCGAGATCGCTTGAGAAACACACCCGAGTGA
AAATTGAGATTATAATAAAGGTAAAACCTGGAGTTGAAGAATGGGGGTGC
TTGATTGGGTCCACAGAAAAAAATAAAATAAATGGCATGGTGATTCAAAT
ACAAAAGGGAAGAAAAAAAAGCTACAAACTTGCAAATACCAAATAGCTTT
TCGTGGATGGAGCAACACCCAAAACGACCAGGTGGGGAAAAAAAAACAAA
AAAGAGGGGGACAACCGAACACAGTTTAATAACCAATCCAGACAAACTGT
AACAAAAAATAGGACGATCTCTACGGGAGGCTCCCATATATACACAAATT
TTATAGGTTATTTTATAGACCTTTAATTGGGGGAGATCGGACATAAATTT
CAAGAAGGGTGCAAAAATATTGCCAGTTCGATTTATACATTTAATAATAC
AACTTTTATAAATTTTATCTACCAAAAAAAAGGGGCCTGAAAAACCATCT
GACAA
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