EY684785 | Citrus Genome Database

Overview


Name	EY684785
Unique Name	EY684785
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	886

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
EY684785_ssr106	microsatellite	EY684785_ssr106:106..115.	BLAST: Citrus ESTs to Prunus persica proteins V1
EY684785_ssr576	microsatellite	EY684785_ssr576:576..585.	BLAST: Citrus ESTs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_PYRTR (ATPase get3 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=get3 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 66/128 (51.56%), Postives = 92/128 (71.88%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            L+ +++ +++ I  VN QF D DLTTFVCVCIPEFLSLYETER++QEL  +EIDTH+I++NQ+L+  +D   +   AR +MQ+KYLD    LYD+F++ +M LL E+  G E LE FS+  V  + PP
Sbjct:  211 LIEKMENLRETIGEVNGQFKDADLTTFVCVCIPEFLSLYETERMIQELNSYEIDTHSIVVNQLLFPKQDNPCEQCNARRKMQKKYLDQIEELYDEFNVVKMPLLVEEVRGKEKLEKFSEMLVKPFVPP 338

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_COCIM (ATPase GET3 OS=Coccidioides immitis GN=GET3 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32
Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            +L +++ +++ I  VN QF D DLTTFVCVCI EFLSLYETER++QELT ++IDTH I++NQ+L+  +D   +  +AR +MQ+KYLD    LY+DF++ +M LL E+  G E LE FS   V  Y PP
Sbjct:  210 VLSKMESLRETISEVNAQFKDADLTTFVCVCIAEFLSLYETERMIQELTSYQIDTHAIVVNQLLFPGKDSTCEQCKARRKMQKKYLDEIAELYEDFNVVRMPLLVEEVRGKEKLERFSDMLVHPYQPP 337

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_PENCW (ATPase get3 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=get3 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.972e-32
Identity = 65/128 (50.78%), Postives = 92/128 (71.88%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            LL +++ +++ I  VN QF +PD+TTFVCVCI EFLSLYETER++QELT + IDTH+I++NQ+L+  E  + +   AR +MQ+KYLD    LY+DF++ +M +L E+  G E LE FS+  V  Y PP
Sbjct:  212 LLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYNIDTHSIVVNQLLFPKEGSDCEQCTARRKMQKKYLDQIEELYEDFNVVRMPMLVEEVRGKEKLEKFSEMLVTPYVPP 339

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_ASPCL (ATPase get3 OS=Aspergillus clavatus GN=get3 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.576e-32
Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            LL +++ +++ I  VN QF +PD+TTFVCVCI EFLSLYETER++QELT + IDTH I++NQ+L+  +  E +   AR +MQQKYL+    LY+DF++ +M LL E+  G E LE FS+  V  Y PP
Sbjct:  212 LLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYSIDTHAIVVNQLLFPKKGSECEQCNARRKMQQKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEMLVHPYVPP 339

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_ASPTN (ATPase get3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=get3 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32
Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPPN 387
            LL +++ +++ I  VN QF D DLTTFVCVCI EFLSLYETER++QELT + IDTH I++NQ+L+  +  E     AR +MQ+KYL+    LY+DF++ +M LL E+  G E LE FS   V  Y PPN
Sbjct:  212 LLQKMESLRETISEVNSQFKDADLTTFVCVCIAEFLSLYETERMIQELTSYSIDTHAIVVNQLLFPKDGSECDQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSDMLVHPYVPPN 340

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_YARLI (ATPase GET3 OS=Yarrowia lipolytica GN=GET3 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32
Identity = 65/125 (52.00%), Postives = 89/125 (71.20%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TY 375
            +  +L+  +  I  VN QF +PDLTTFVCVCIPEFLSLYETER+VQ+LT F+IDTHNI++NQ+LY  +  + +L  +R +MQQKYL+    LY+DFHI ++    ++  G++ALE FS   V  Y
Sbjct:  198 MFAKLNETRATISEVNTQFKNPDLTTFVCVCIPEFLSLYETERMVQDLTSFDIDTHNIVVNQLLYPKKGDDCELCSSRYKMQQKYLEQILDLYEDFHIVRLPQQTQEVRGVQALEKFSNLLVHPY 322

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_EMENI (ATPase get3 OS=Emericella nidulans GN=get3 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.739e-32
Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPPN 387
            LL +++ +++ I  VN QF +PD+TTFVCVCI EFLSLYETER++QELT ++IDTH I++NQ+L+  +  + +   AR +MQ+KYL+    LY+DF++ +M LL E+  G E LE FS   +  Y PPN
Sbjct:  212 LLQKMESLRETIGEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYQIDTHAIVVNQLLFPKQGSDCEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSDMLINPYVPPN 340

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_SCHPO (ATPase get3 OS=Schizosaccharomyces pombe GN=get3 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.495e-32
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            L G+++ M+  I  VNKQF +PDLTTFVCVCI EFLSLYETER++QELT +EIDTHNI++NQ+L D      + + AR +MQQKYL     LY+DFH+ ++  +P +  G EAL++FS+  V  Y  P
Sbjct:  198 LFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLDPNTTCPQCM-ARRKMQQKYLAQIEELYEDFHVVKVPQVPAEVRGTEALKSFSEMLVKPYVYP 324

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_ASPNC (ATPase get3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=get3 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.495e-32
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            LL +++ +++ I  VN QF D DLTTFVCVCI EFLSLYETER++QELT + IDTH I++NQ+L+  +  E +   AR +MQ+KYL+    LY+DF++ +M LL E+  G E LE FS   V  Y PP
Sbjct:  211 LLQKMESLRETISEVNSQFKDADLTTFVCVCIAEFLSLYETERMIQELTSYNIDTHAIVVNQLLFPKQSSECEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSDMLVNPYVPP 338

[Close]

BLAST of EY684785 vs. ExPASy Swiss-Prot
Match: GET3_PENMQ (ATPase get3 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=get3 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.279e-31
Identity = 64/128 (50.00%), Postives = 91/128 (71.09%), Query Frame = 1

Query:    1 LLGRLDRMKDVIERVNKQFTDPDLTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLYDDEDVESKLLRARMRMQQKYLDPFYMLYDDFHITQMTLLPEQETGIEALEAFSQDFV*TYPPP 384
            L+ +++ +++ I  VN QF +PD+TTFVCVCI EFLSLYETER++QELT + IDTH I++NQ+L+  +D   +   AR +MQ+KYL+    LY+DF++ +M LL E+  G E LE FS+  V  Y PP
Sbjct:  212 LMSKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFPKKDNPCEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEMLVKPYVPP 339

The following BLAST results are available for this feature:

BLAST of EY684785 vs. ExPASy Swiss-Prot

BLAST of EY684785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107


Match Name	E-value	Identity	Description
GET3_PYRTR	1.156e-32	51.56	ATPase get3 OS=Pyrenophora tritici-repentis (strai...	[more]
GET3_COCIM	1.510e-32	51.56	ATPase GET3 OS=Coccidioides immitis GN=GET3 PE=3 S...	[more]
GET3_PENCW	1.972e-32	50.78	ATPase get3 OS=Penicillium chrysogenum (strain ATC...	[more]
GET3_ASPCL	2.576e-32	51.56	ATPase get3 OS=Aspergillus clavatus GN=get3 PE=3 S...	[more]
GET3_ASPTN	3.365e-32	51.94	ATPase get3 OS=Aspergillus terreus (strain NIH 262...	[more]
GET3_YARLI	4.394e-32	52.00	ATPase GET3 OS=Yarrowia lipolytica GN=GET3 PE=3 SV...	[more]
GET3_EMENI	5.739e-32	49.61	ATPase get3 OS=Emericella nidulans GN=get3 PE=3 SV...	[more]
GET3_SCHPO	7.495e-32	53.13	ATPase get3 OS=Schizosaccharomyces pombe GN=get3 P...	[more]
GET3_ASPNC	7.495e-32	51.56	ATPase get3 OS=Aspergillus niger (strain CBS 513.8...	[more]
GET3_PENMQ	1.279e-31	50.00	ATPase get3 OS=Penicillium marneffei (strain ATCC ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C2-003-003-F04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY684785 ID=EY684785; Name=EY684785; organism=Citrus sinensis; type=EST; length=886bp
CTCTTAGGAAGGCTTGACCGTATGAAAGATGTGATTGAACGAGTTAATAA
GCAGTTCACGGACCCAGACTTGACAACCTTTGTCTGTGTTTGCATTCCAG
AGTTCCTCTCTCTCTATGAAACTGAGCGACTTGTGCAGGAGCTAACCAAG
TTTGAGATTGATACACATAATATTATTATTAACCAAGTACTTTATGATGA
TGAAGATGTTGAATCGAAGTTGCTCAGAGCTAGAATGCGAATGCAACAAA
AGTACCTCGATCCGTTCTACATGTTGTATGATGACTTTCACATCACCCAG
ATGACTTTGCTGCCAGAACAGGAAACTGGGATTGAAGCACTGGAAGCTTT
TTCACAAGATTTTGTCTAAACATATCCGCCCCCAAACTGAACCCAGGCCG
GGCGACCACCCTCCTGAGACACCCACCCTCCAAGGCCAGGAACAGAACGC
ATACGAGAATCAGAAGAAAAAAACACACACAAAAAAACCCGAGCGCAAGG
ACCGTCATACACGCACACCCTCAGCAGAGCGAAACGGCAGCCCACGTACC
ACCAAAAGACACCACCCCCACACACCACACACACAGCAGCGCACGGGAGA
TCGAAAGAACAGCATACCAAGAAAACAAGCACCGACTCAACAGATACGGA
CTCAACCCGACAGCCACGCCGGTACCCACCAAAGTACGCGCAATAGGTGC
AAGAAAGTAACCTGGCAGAACGACACAGGCGGATAAAGCAAGCAACCCCA
CTCCGGTCCAGAGGCGCGGTCTCAGAAACGACGATAGCATGCGTCACCCC
ACCGACACACAGCCAAGGCAGACCAGACATGACTGCAACACAGAACACGC
CTAGCGACCGAACCCAAAGACACCTACAAAGGACGA