EY684744

Overview
NameEY684744
Unique NameEY684744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS5_ARATH (Imidazole glycerol phosphate synthase hisHF, chloroplastic OS=Arabidopsis thaliana GN=At4g26900 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.797e-46
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            REGRPIGA+ELAKAVE+LGAGEILLNCIDCDGQGKGFD+DL+KLISD+V IPVIASSGAG  +HFS+VF KTNASAALAAGIFHRKEVPIQSVKEHL +E IEVRI
Sbjct:  487 REGRPIGAFELAKAVEELGAGEILLNCIDCDGQGKGFDIDLVKLISDSVGIPVIASSGAGTPDHFSEVFEKTNASAALAAGIFHRKEVPIQSVKEHLQEERIEVRI 592          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS5_YEAST (Imidazole glycerol phosphate synthase hisHF OS=Saccharomyces cerevisiae GN=HIS7 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.904e-29
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            RE R +G +EL +A E LGAGEILLNCID DG   G+D++LI+ + DAV IPVIASSGAG  EHF + F KT A A L AG+FHR E  +  VKE+L + G++VR+
Sbjct:  444 RESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVRM 549          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS5_SCHPO (Imidazole glycerol phosphate synthase hisHF OS=Schizosaccharomyces pombe GN=his4 PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.748e-25
Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            RE R I   EL +A E +GAGE+LLNC+D DG   G+D++L++L+ ++V+IPVIASSGAG  +HF +VF++T+  AALAAGIFHR+   I+ VKE+L    + VR
Sbjct:  436 REYRDIDVVELTRACEAMGAGEVLLNCMDQDGSNAGYDIELVRLVKNSVNIPVIASSGAGIPQHFEEVFKETDCDAALAAGIFHRQTCRIEDVKEYLAIHDVLVR 540          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS5_EMENI (Imidazole glycerol phosphate synthase hisHF OS=Emericella nidulans GN=hisHF PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 1
Query:    1 REGRPIGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            RE R +   +L +AVE +GAGEILLNCID DG   GFD++LI  +  AV IPVIASSGAG  +HF +VF +T   AAL AG+FHR E  +  VK++L   G  VR
Sbjct:  443 RETRDLDVCQLVQAVEAMGAGEILLNCIDKDGSNSGFDLELINHVKAAVKIPVIASSGAGMPKHFEEVFDQTTTDAALGAGMFHRGEYTVGEVKQYLEDRGFLVR 547          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_NITSB (Imidazole glycerol phosphate synthase subunit hisF OS=Nitratiruptor sp. (strain SB155-2) GN=hisF PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24
Identity = 57/99 (57.58%), Postives = 69/99 (69.70%), Query Frame = 1
Query:   22 AYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            A E AK V D GAGEILL  +D DG   G+D++L + ISDAV IPVIAS GAG +EH  D F K +A AALAA IFH KE+ I  +K +L+ EGI VR+
Sbjct:  156 AIEWAKEVYDRGAGEILLTSMDADGTKAGYDLELTRAISDAVDIPVIASGGAGTMEHIKDAFTKGHADAALAASIFHFKEIDIMELKHYLHNEGIPVRL 254          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_THETN (Imidazole glycerol phosphate synthase subunit hisF OS=Thermoanaerobacter tengcongensis GN=hisF PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 1
Query:   16 IGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            + A E AK V+DLGAGEILL  +D DG   G+D++L +LIS+AVSIPVIAS GAG  EHF +VF +  A AALAA +FH  E+ I+ +K +L  EGI VR+
Sbjct:  153 LDAVEWAKKVKDLGAGEILLTSMDKDGTKDGYDIELTRLISEAVSIPVIASGGAGKPEHFKEVFTQGKADAALAASVFHYGELDIKELKRYLKDEGIPVRL 253          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_THEPX (Imidazole glycerol phosphate synthase subunit hisF OS=Thermoanaerobacter sp. (strain X514) GN=hisF PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 1
Query:   28 ELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            E AK VE LGAGEILL  +D DG   G+D++L +++S+AV+IPVIAS GAG  EHF +VF +  A AALAA +FH +E+ I+ VK +L +EGI VRI
Sbjct:  157 EWAKKVESLGAGEILLTSMDKDGTKDGYDIELTRMVSEAVNIPVIASGGAGNKEHFKEVFTEGKADAALAASVFHYRELEIKEVKRYLKEEGIPVRI 253          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_AQUAE (Imidazole glycerol phosphate synthase subunit hisF OS=Aquifex aeolicus GN=hisF PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   16 IGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVR 315
            + A E AK VE LGAGEILL  +D DG   G+D++L + IS+AV+IPVIAS GAG  EHF +VF KT   AALAA +FH +E+ I  +KE+L + GI VR
Sbjct:  151 LDAVEWAKKVESLGAGEILLTSMDRDGTKDGYDIELNRAISEAVNIPVIASGGAGKKEHFYEVFSKTKVEAALAASVFHFREISIPELKEYLLERGINVR 250          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_CLOBL (Imidazole glycerol phosphate synthase subunit hisF OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=hisF PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1
Query:   16 IGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            + A E A+ VE LGAGEIL   +D DG  +G+D++L   +S+AV+IPVIAS G G ++HF ++F K++A AALAA +FH KE+ I+ VK +L KEG  VR+
Sbjct:  153 LDAIEWARKVEKLGAGEILFTSMDADGTKEGYDLELTNEVSEAVNIPVIASGGCGKLKHFGEIFEKSSADAALAASLFHFKELSIKEVKNYLKKEGFSVRL 253          
BLAST of EY684744 vs. ExPASy Swiss-Prot
Match: HIS6_CLOBJ (Imidazole glycerol phosphate synthase subunit hisF OS=Clostridium botulinum (strain Kyoto / Type A2) GN=hisF PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 1
Query:   16 IGAYELAKAVEDLGAGEILLNCIDCDGQGKGFDMDLIKLISDAVSIPVIASSGAGAVEHFSDVFRKTNASAALAAGIFHRKEVPIQSVKEHLYKEGIEVRI 318
            I A E A+ VE LGAGEILL  +D DG  +G+D++    +S AV+IPVIAS G G ++HF ++F K++A AALAA +FH KE+ I+ VK +L KEG  VR+
Sbjct:  153 IDAIEWARKVEKLGAGEILLTSMDADGTKEGYDLEFTNEVSKAVNIPVIASGGCGKLKHFGEIFEKSSADAALAASLFHFKELSIKEVKNYLKKEGFSVRL 253          
The following BLAST results are available for this feature:
BLAST of EY684744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS5_ARATH1.797e-4686.79Imidazole glycerol phosphate synthase hisHF, chlor... [more]
HIS5_YEAST9.904e-2957.55Imidazole glycerol phosphate synthase hisHF OS=Sac... [more]
HIS5_SCHPO1.748e-2553.33Imidazole glycerol phosphate synthase hisHF OS=Sch... [more]
HIS5_EMENI4.306e-2454.29Imidazole glycerol phosphate synthase hisHF OS=Eme... [more]
HIS6_NITSB5.624e-2457.58Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_THETN2.137e-2356.44Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_THEPX3.645e-2356.70Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_AQUAE3.645e-2356.00Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CLOBL4.761e-2351.49Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CLOBJ6.218e-2352.48Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684744 ID=EY684744; Name=EY684744; organism=Citrus sinensis; type=EST; length=875bp
CGAGAAGGTCGACCAATTGGAGCTTATGAGCTTGCCAAAGCAGTTGAAGA
TCTTGGAGCTGGAGAGATACTATTGAATTGCATTGACTGTGATGGTCAAG
GGAAAGGGTTTGATATGGATCTAATAAAGTTGATCTCAGATGCTGTGAGC
ATCCCTGTGATTGCAAGTAGTGGTGCAGGTGCTGTTGAGCACTTCTCTGA
TGTTTTTAGGAAAACAAATGCATCTGCTGCCCTTGCTGCTGGCATTTTCC
ATCGAAAGGAGGTCCCCATTCAGTCTGTAAAAGAGCATTTGTACAAGGAA
GGGATAGAAGTTAGGATCTAACTTGGTGAATTCTGGGTAAGTTGGGATTT
AATGGTTGGCATTTGAACTTGATGAATACACTTTGCTTCGGATGAAGAAT
GAGGTAGTGAAGACTACAAGTAAAGATGGGCTGCACACTCCTCAAAGTGG
CTTTCTTCTGCTGACTTCCAAGCATTCCATGGATGACGCCCCACTAGGAC
CCACACACCCACACCTGGACCCCTCGACCACAACCGAAGTCCCTCCCCGA
AAAACCCACAATACCCTAACCAAGACGCCCCACACTCGAAATCCGCGCAT
TACAGCCACTGGGAGTCAGCCCGGGACGACCGCGCCAACCGACACAAAAA
GAACCGCACTCTCCAACCCGCAACACACATCCCCACCATGAAACAGCGAA
GGCAGAACCAAACAAAACACCACACGAGGGGAGACAACAACACGAAGCAA
GGGCAAACCACACGAGTCATGAACAACACAAAACCCCACCCCCCGCCACG
CGACGAACACGCCAACAAAGAGGCACACGGAACACAACCACACGAGCACG
CCCCACCACGACCCCACACGCCCTA
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