EY710203

Overview
NameEY710203
Unique NameEY710203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1048
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710203 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 4.610e-26
Identity = 89/240 (37.08%), Postives = 120/240 (50.00%), Query Frame = 2
Query:    2 RHFASAFPFSRLALPGPEEKAIVSANENRTNTQNPAMMINQLPLPLTHATDLPVGKLEIAVNNCXXXXXXXXXXXXXRVQVSENDIEDTFC-EDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGSSIYSCTQA*EWESSTNETPKCMKLPDSHPLLHEMKKKEPGMTHEEILLAIWDTR*NGKIQYNPPEK*GAVFSKNRV--KLCKEKKMIFKAT--RVRETQIFP 706
            RHFASA+  +RLALP PEE+++ SA         P + I  + LPL     L  G       NC               +++E+DIED +  EDP+EIPTIKLN+++F  TL+ +M+ N+ELQEGDMSKALVAL   ++    T   +  S      +  +LPDSH LL  M K+EP       LLAIW           P +K G   S      + C E   + +A    VR T + P
Sbjct: 1646 RHFASAYASARLALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASGAPSNR-ENCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEIPTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIP-TPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPD-DPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIP 1882          
BLAST of EY710203 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.299e-20
Identity = 74/191 (38.74%), Postives = 96/191 (50.26%), Query Frame = 2
Query:    2 RHFASAFPFSRLALPGPEEKAIVSANENRTNTQNPAMMINQLPLPLTHATDLPV---GKLEIAVNNCXXXXXXXXXXXXXRVQVSENDIEDTFCEDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGSSIYSCTQA*EWESSTNETPKCMKLPDSHPLLHEMKKKEPGMTHEEILLAIW 565
            RHFASAF  +RLALP  E+          T  +NP  +   LP P        V    +    V  C               +VS  DIE+ F EDPEEIPTI+LNM  FT  L+  M+ N ELQ+G+MS ALVALTA ++     +  +  S      +  +LPD HPLL +++K+EP       LLAIW
Sbjct: 1055 RHFASAFASARLALPSTEKGM-------GTPDKNPLPL--HLPEPFQREQGSEVVQHSEPAKKVTCCEPIIEEPASPEPETAEVSIADIEEAFFEDPEEIPTIRLNMDAFTSNLKKIMEHNKELQDGNMSSALVALTAETASLPMPKL-KNISQLRTEHRVYELPDEHPLLAQLEKREPD-DPCSYLLAIW 1234          
The following BLAST results are available for this feature:
BLAST of EY710203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DME_ARATH4.610e-2637.08Transcriptional activator DEMETER OS=Arabidopsis t... [more]
ROS1_ARATH1.299e-2038.74Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-091-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710203 ID=EY710203; Name=EY710203; organism=Citrus sinensis; type=EST; length=1048bp
CAGGCATTTTGCAAGTGCATTCCCTTTTTCAAGACTTGCACTTCCAGGGC
CGGAGGAGAAAGCCATAGTGAGTGCAAATGAAAATAGAACAAATACCCAA
AATCCTGCAATGATGATCAATCAACTACCTCTTCCTCTAACTCATGCAAC
CGATCTACCAGTCGGAAAATTAGAAATTGCTGTTAATAACTGTGAGCCTA
TCATTGAAGAGCCAGCGACACCAGAACCAGAGCGTGTACAAGTATCAGAA
AATGACATCGAAGATACATTCTGTGAAGATCCAGAAGAGATTCCTACTAT
CAAGCTTAACATGAAAGAGTTTACTCAGACCTTACAGAATTATATGCAAG
AGAATTTGGAGCTTCAAGAAGGTGATATGTCCAAAGCTTTAGTTGCTTTA
ACAGCGGGGAGCAGCATCTATTCCTGCACCCAAGCTTAAGAATGGGAGTC
GTCTACGAACGAAACACCAAAGTGTATGAAACTTCCAGATTCACACCCTC
TTTTGCATGAGATGAAAAAAAAAGAACCTGGAATGACCCATGAAGAAATC
CTTCTTGCCATATGGGACACCAGGTGAAACGGGAAAATTCAATACAACCC
CCCTGAAAAGTAAGGAGCAGTTTTCTCCAAAAACAGGGTAAAATTGTGCA
AGGAGAAAAAAATGATTTTTAAAGCAACCAGGGTTCGGGAAACCCAAATT
TTTCCTAATTTCTCCAGGGGACCTTTTTTATAACTCCGTGTTCAAAACCG
CATGGAAAAGGAAACCTTTTCCCCCAAAAAGGGGAAAATAATTTCACCAG
GTTAAAGGGAGAATTTTTTGCCAAAACCCCCGGATTTCACCCCTTTGAAA
ACCCCCCATTTAAATTTTTCCCCAGGGGAATGGGGGTTAAGGGGGAAACC
ACCCACCACTGGCGGCGAACTAGTGGATTATTTTTTGAAGAAAACCCTCC
TTAATAACATCATTTACAATAAAATTATAAAGAAGAGACGTTTATTATAA
AACACAAATAAAAGCAGAGAACGGAAGATCCATACACCCCCTCCCGAG
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