EY684716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=2 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 5.717e-67 Identity = 152/249 (61.04%), Postives = 181/249 (72.69%), Query Frame = 3 Query: 9 SAQSP---PMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFS-SGAPQCVLPSV-EQLGPPH-ANISQNSISLPPFPG-RECSIDQEGSA-DPQSHLLFGVNIEPSSLLMQNEMSSLGGVG-SNSDSTTIPFASSNYMSTAGADFSVNPEIA-PSSCIDESGFLQSPENVGQVNPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 SA P P+Q+++SLC QQSFSD+NG NPI SPLH+LL +++QDESS LL+L R+N + S WPSKR AV+ F SGA SV EQLG H +N+ N++SLPPFPG RECSI+QEGSA DP SHLLFGVNI+ SSLLM N MS+L +G DSTT+PF SSN+ + DFS N + PSSCIDESGFLQS EN+G NP + TFVKVY SGSFGRSLDI+ FS+Y ELR ELARM Sbjct: 588 SASQPNTSPLQSMTSLCHQQSFSDTNGG--NNPI-SPLHTLLSNFSQDESSQLLHLTRTNSAMTSSGWPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFNN----DFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARM 829
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSJ (Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.912e-46 Identity = 103/242 (42.56%), Postives = 150/242 (61.98%), Query Frame = 3 Query: 6 ASAQSPP--MQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 ++ QS P +Q +S QQ +F D+N + + VS +H L S+ + +S L +PR P+ S W SKR AVE +S P + +E ++I QNS +L P PGREC +DQ+GS+DPQ+H LFGVNI+ SLLMQ+ + SL S+S TIP+++SN++S + D+ ++ + C+DESG++ +N QV P+ TFVKVY SG+ GR LDIT FS+Y ELR E+ R+ Sbjct: 574 STPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVSSMHDTLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITS-RPHDISSQIENFDLTPSSIPQNS-TLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHNENSSS---TIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKSGTVGRLLDITRFSSYHELRSEVGRL 810
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSI (Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.912e-46 Identity = 103/242 (42.56%), Postives = 150/242 (61.98%), Query Frame = 3 Query: 6 ASAQSPP--MQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 ++ QS P +Q +S QQ +F D+N + + VS +H L S+ + +S L +PR P+ S W SKR AVE +S P + +E ++I QNS +L P PGREC +DQ+GS+DPQ+H LFGVNI+ SLLMQ+ + SL S+S TIP+++SN++S + D+ ++ + C+DESG++ +N QV P+ TFVKVY SG+ GR LDIT FS+Y ELR E+ R+ Sbjct: 574 STPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVSSMHDTLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITS-RPHDISSQIENFDLTPSSIPQNS-TLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHNENSSS---TIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKSGTVGRLLDITRFSSYHELRSEVGRL 810
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.563e-46 Identity = 108/241 (44.81%), Postives = 154/241 (63.90%), Query Frame = 3 Query: 12 AQSPPM--QAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQV-NPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 +QS PM Q + Q QS+ D++ + + S +H+ L ++ + SHL ++PR + W SKR AVE L S PQ V +EQL +I Q+S +L P PGR C +DQ+G++DPQ+HLLFGVNI+ SLLMQ + SL G +DST IP+++SN++S + DF ++ ++ + C+DESG++ +N QV N P TFVKVY SG++GRSLDIT FS+Y ELRREL R+ Sbjct: 586 SQSSPMTLQTVLPFSQPQSYPDTSMSSLSPSNTSTMHNALRPFSSEAPSHL-SMPRPTAVPVPDPWSSKRVAVESLLPS-RPQ-VTSQMEQLDSTAPSIPQSS-ALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSLLMQGGIPSLQG---ENDSTAIPYSTSNFLSPSQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPPATFVKVYKSGTYGRSLDITRFSSYHELRRELGRL 819
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.489e-46 Identity = 108/241 (44.81%), Postives = 153/241 (63.49%), Query Frame = 3 Query: 12 AQSPPM--QAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQV-NPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 +QS PM Q + Q QS+ D++ + + S +H+ L ++ + SHL ++PR + W SKR AVE L S PQ V +EQL +I Q+S +L P PGR C +DQ+G++DPQ+HLLFGVNI+ SLLMQ + SL G +DST IP+++SN++S DF ++ ++ + C+DESG++ +N QV N P TFVKVY SG++GRSLDIT FS+Y ELRREL R+ Sbjct: 586 SQSSPMTLQTVLPFSQPQSYPDTSMSSLSPSNTSTMHNALRPFSSEAPSHL-SMPRPTAVPVPDPWSSKRVAVESLLPS-RPQ-VTSQMEQLDSTAPSIPQSS-ALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSLLMQGGIPSLQG---ENDSTAIPYSTSNFLSPLQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPPATFVKVYKSGTYGRSLDITRFSSYHELRRELGRL 819
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFY_ORYSJ (Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.231e-28 Identity = 91/242 (37.60%), Postives = 126/242 (52.07%), Query Frame = 3 Query: 6 ASAQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSL-GGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPN-RTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 AS QA SSL SF + N + LH+ +++ E+S+LL LPRS+ L+ S WPSKR +E AP + P +E++ H IS + PP R CSI Q+ AD ++ LL SS +Q+ M+S+ +D+ IP + +GAD + +A S+C+ ESG N+ VNP TFVKVY SGS GRSLDI+ FS+Y ELR EL R+ Sbjct: 573 ASESGSAPQAQSSLLSGSSFYNQNLLEGNSDPPLHLHNNFHNFSNQEASNLLILPRSSQLMASDGWPSKRLTLESAVHPEAPS-MHPKIEKVN--HQGISHFPGAFPPQSARGCSIVQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPL-----LRYSGADLTTENTLATSNCLGESGTFNPLNNIS-VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSELERL 799
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSJ (Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16 Identity = 76/235 (32.34%), Postives = 108/235 (45.96%), Query Frame = 3 Query: 24 PMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDES-GFLQSPENVGQVNPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 P S L ++ FSD N N ++ S ++L S SS ++L R N + S ++ A + F SV P ++ S++ + D Q+ LF ++ SSLL N + +L S+ + +TIP + S Y+ A C+D+S G LQ N G+ +P RTFVKVY SGS GRSLDIT FSNY ELR EL +M Sbjct: 549 PTSLPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQAWKQKFMGSQSVSFGGSVLHNSPT---------------SKDGSVENKIGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSNVSDGNLSTIP-SGSTYLQNA-----------MYGCLDDSSGLLQ---NTGENDPATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQM 752
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSI (Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 76/240 (31.67%), Postives = 110/240 (45.83%), Query Frame = 3 Query: 24 PMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSP-----TWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDES-GFLQSPENVGQVNPPNRTFVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 P S L ++ FSD N N ++ S ++L S SS ++L R N + S W K + + G+ + NS + ++ S++ + D Q+ LF ++ SSLL N + +L S+ + +TIP + S Y+ A C+D+S G LQ N G+ +P RTFVKVY SGS GRSLDIT FSNY ELR EL +M Sbjct: 549 PTSLPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQAWKQKFMGSQSVSFGGS-----------------VLHNSPT-----SKDGSVENKIGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSNVSDGNLSTIP-SGSTYLQNA-----------MYGCLDDSSGLLQ---NTGENDPATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQM 750
BLAST of EY684716 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.406e-11 Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 252 QCVLP---SVEQLGPPHANISQNSISLPP-FPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRT--FVKVYNSGSFGRSLDITNFSNYLELRRELARM 725 Q VLP + E P +N +SLP +PG+ +++ +PQ+ LFGV+ + S L + + + +++++ + S + ++ SC+ ++ + GQ+N N+T FVKVY SGS GRSLDI+ FS+Y ELR EL +M Sbjct: 592 QSVLPEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEP---GNPQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSL------------YSCMQDTTH-ELLHGAGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKM 738 The following BLAST results are available for this feature:
BLAST of EY684716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684716 ID=EY684716; Name=EY684716; organism=Citrus sinensis; type=EST; length=774bpback to top |