EY684713

Overview
NameEY684713
Unique NameEY684713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684713_ssr364 microsatellite EY684713_ssr364:364..375. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: CDC20_DICDI (Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.359e-48
Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 3
Query:   30 HRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 404
            H  E+HT+AV+A+AWCPFQ NLLATGGG  DR I+FWNT TG CLN+VDT SQVC++ W+   REL+SSHG++QNQL +WKYPSMVK AEL+GHTSR L  A SPDG TV SA+ADETLRFW VF
Sbjct:  345 HTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWNTITGVCLNTVDTMSQVCSIQWSTTYRELVSSHGYSQNQLCVWKYPSMVKCAELTGHTSRALHTAISPDGETVVSASADETLRFWRVF 469          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: FZR3_ARATH (Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.441e-45
Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 3
Query:    9 NSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 404
            N   Q + +L EHT+AVKAI W P QS+LLA+GGG  DRCI+FWNT  G  LNS+DTGSQVC L W+KN  E++S+HG++QNQ+ LWKYPSM K+A L+GH+ RVL++A SPDG T+ + A DETLRFWNVF
Sbjct:  327 NHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: CDC20_HUMAN (Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 80/126 (63.49%), Postives = 98/126 (77.78%), Query Frame = 3
Query:   27 LHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 404
            L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHTSRVL +  SPDG TVASAAADETLR W  F
Sbjct:  348 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 473          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: CDC20_RAT (Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44
Identity = 80/138 (57.97%), Postives = 101/138 (73.19%), Query Frame = 3
Query:   27 LHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPK 440
            L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F     + +   K
Sbjct:  348 LQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWRCFELDPALRREREK 485          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: CDC20_MOUSE (Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44
Identity = 80/138 (57.97%), Postives = 101/138 (73.19%), Query Frame = 3
Query:   27 LHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPK 440
            L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F     + +   K
Sbjct:  348 LQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLGLTMSPDGATVASAAADETLRLWRCFEMDPALRREREK 485          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: CDC20_PIG (Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.854e-44
Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 3
Query:   27 LHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 404
            L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F
Sbjct:  348 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWRCF 473          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: FZR1_ARATH (Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.984e-43
Identity = 81/139 (58.27%), Postives = 105/139 (75.54%), Query Frame = 3
Query:   18 TQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSA 434
            TQ + R  EH +AVKAIAW P    LLA+GGG  DRCI+FWNT T   LN VDT SQVC L+W+KN  EL+S+HG++QNQ+ +WKYP+M K+A L+GH+ RVL++A SPDG T+ + A DETLRFWNVF +P+  S+ +
Sbjct:  324 TQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRES 462          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: FZR2_ARATH (Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 80/133 (60.15%), Postives = 103/133 (77.44%), Query Frame = 3
Query:   18 TQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQ 416
            TQ + +  EHT+AVKAIAW P    LLA+GGG  DRCI+FWNT T   L+S+DT SQVC L W+KN  EL+S+HG++QNQ+ +WKYP+M K+A L+GHT RVL++A SPDG T+ + A DETLRFWNVF +P+
Sbjct:  332 TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 464          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: FZR_MOUSE (Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.638e-41
Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 3
Query:    9 NSVTQWLH-------RLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKS 431
            N +  W H       +  EH +AVKAIAW P Q  LLA+GGG  DRCI+FWNT TG  L  +DTGSQVC L W+K+  EL+S+HG++QNQ+ +WKYPS+ ++A+L+GH+ RVL++A SPDG  + + A DETLRFWNVF   +   +S
Sbjct:  335 NKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKES 482          
BLAST of EY684713 vs. ExPASy Swiss-Prot
Match: FZR_HUMAN (Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.139e-41
Identity = 77/139 (55.40%), Postives = 101/139 (72.66%), Query Frame = 3
Query:    9 NSVTQWLH-------RLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 404
            N +  W H       +  EH +AVKAIAW P Q  LLA+GGG  DRCI+FWNT TG  L  +DTGSQVC L W+K+  EL+S+HG++QNQ+ +WKYPS+ ++A+L+GH+ RVL++A SPDG  + + A DETLRFWNVF
Sbjct:  335 NKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 473          
The following BLAST results are available for this feature:
BLAST of EY684713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CDC20_DICDI2.359e-4870.40Anaphase-promoting complex subunit cdc20 OS=Dictyo... [more]
FZR3_ARATH2.441e-4562.88Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN... [more]
CDC20_HUMAN3.525e-4463.49Cell division cycle protein 20 homolog OS=Homo sap... [more]
CDC20_RAT4.604e-4457.97Cell division cycle protein 20 homolog OS=Rattus n... [more]
CDC20_MOUSE6.014e-4457.97Cell division cycle protein 20 homolog OS=Mus musc... [more]
CDC20_PIG7.854e-4462.70Cell division cycle protein 20 homolog OS=Sus scro... [more]
FZR1_ARATH2.984e-4358.27Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN... [more]
FZR2_ARATH3.898e-4360.15Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN... [more]
FZR_MOUSE1.638e-4152.70Fizzy-related protein homolog OS=Mus musculus GN=F... [more]
FZR_HUMAN2.139e-4155.40Fizzy-related protein homolog OS=Homo sapiens GN=F... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-F06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684713 ID=EY684713; Name=EY684713; organism=Citrus sinensis; type=EST; length=841bp
GCTTCTTCAATTCTGTAACACAGTGGCTTCACAGACTAGAGGAACACACA
TCTGCTGTCAAGGCTATTGCTTGGTGTCCTTTCCAGAGCAATTTATTAGC
CACTGGTGGAGGTGGAGGTGATCGGTGTATAAAATTCTGGAACACTCACA
CCGGGGCATGCTTGAATTCTGTAGATACGGGATCTCAAGTCTGTGCTTTG
CTTTGGAACAAGAATGAGAGAGAGTTGCTTAGCTCCCATGGCTTTACACA
GAATCAACTCACACTATGGAAATACCCTTCAATGGTGAAGATGGCAGAGC
TTAGTGGGCATACCTCAAGAGTGCTGTTCATGGCGCAGAGCCCAGATGGC
TGTACAGTGGCATCAGCAGCAGCAGATGAAACACTCAGATTTTGGAATGT
TTTCGGGGCTCCCCAAGTAATTTCTAAATCTGCTCCTAAACCTAACCGCG
AACCATTTGCGCAGTTGAATCGCATACGGTGACAAGTGATAACATTATAT
TGTATATACTCGATCTGTACATATATACAGATTTTGGCCAAATACACACC
CCCGTGTTTTTGGTCACTTGATTGAGTGACTTTAATTAATTATCACTTGA
TCTTGGGCAGTAACTTTACGTAAACAACTTTCCTAATACACCCCCCCGTG
TTTTTGGTCCCTTTGATTGAGTGACTTTAATTACTTATCACTTGATCTTT
GGCCAGTAACTTTTACGTTAAACAACTTTTCTAAATTACTTCTTCCCCCN
ACACAACAACAATAAAACCAAAAGAAAAGAAGCATAGCAAGGGAAACGCA
CGAATCCCCACAAAAAGAGCAAAGAAGAAAAACACCATGCA
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