EY684693

Overview
NameEY684693
Unique NameEY684693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684693_ssr358 microsatellite EY684693_ssr358:358..369. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.056e-57
Identity = 118/219 (53.88%), Postives = 157/219 (71.69%), Query Frame = 1
Query:    1 LASGLAWTDL--WVTAPDGPTKGNGSILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            +++ L W DL   VT  DG T+   ++L GLTGYA P  L A+MGPSG G ST+LDALA RL +N   +G +L+NGRK  L++GT+AYVTQDD LI TLTV E ++YSA+++LPD M + +K+   E TI EMGLQD  +T IG W  +G+SGG+KRRVSI +E+L RP+LLFLDEPTSGLDSA++++V   +  L +       RT+I SI QP++EV
Sbjct:   46 VSARLTWQDLTVMVTMGDGETQ---NVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNGRKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSR-----DGRTVIASIHQPSSEV 256          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.202e-53
Identity = 111/216 (51.39%), Postives = 149/216 (68.98%), Query Frame = 1
Query:   13 LAWTDLWVTAP---DGPTKGNGSILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            LAW DL V  P   DGPT+    +L  L GYA P  ++AIMGPSG G STLLD+LAGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+LP  M+K +  +  E TI E+GLQD  +  IG W A+G+SGG+++RVSI +E+LTRP++LFLDEPTSGLDSA++++V+  +  + +       RT+I S+ QP++EV
Sbjct:   25 LAWEDLTVVIPNFSDGPTR---RLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVVMTGNLLLNGKKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIAR-----DGRTVISSVHQPSSEV 232          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.266e-52
Identity = 108/216 (50.00%), Postives = 150/216 (69.44%), Query Frame = 1
Query:   13 LAWTDLWVTAPD---GPTKGNGSILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            LAW DL V  P+   GPT+    +L GL G+A P  ++AIMGPSG G STLLD+LAGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+L   +TK +  +  E TI E+GLQD  +  IG W ++G+SGG+++RVS+ +E+LTRP++LFLDEPTSGLDSA++++V+  +  + +     G RT++ SI QP++EV
Sbjct:   24 LAWEDLTVVIPNFSGGPTR---RLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNGKKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARD----GGRTVVSSIHQPSSEV 232          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.274e-51
Identity = 101/213 (47.42%), Postives = 145/213 (68.08%), Query Frame = 1
Query:   13 LAWTDLWVTAPDGPTKGNGSILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            +AW DL V  P+        +L G+ G   P  +LAIMGPSG G STLLDALAGRL  N   +G++L+NG+KR L +G +AYVTQ+D L+ TLTV E++ YSA L+LP  +T+ +  +  E TI +MGL++  +  IG W  +G+SGG+K+R+SI +E+LT+P LLFLDEPTSGLDSA++++V+  +  +         +T++ SI QP+ EV
Sbjct:   10 VAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNI-----ASSGKTVVSSIHQPSGEV 217          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.324e-35
Identity = 82/195 (42.05%), Postives = 122/195 (62.56%), Query Frame = 1
Query:   70 SILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRK-RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            +IL G+TG   P E LA++GPSG G +TLL AL GRL      +G+++ NG+         + +V QDD L   LTV E ++++A L+LP ++T+ +K E  +  I E+GL    N+ IGG   +G+SGG+K+RVSI  EML  P LL LDEPTSGLDS  ++ +++ I +L       G RT++ +I QP++ +
Sbjct:   80 TILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLSKTF--SGKVMYNGQPFSGCIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRL-----ASGGRTVVTTIHQPSSRI 267          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.131e-34
Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 1
Query:   70 SILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRL-GSNTRQAGEILIN-GRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            +IL+G+TG   P E +A++GPSG G STLL+A+AGRL GSN    G+ILIN G+        + +V QDD L   LTV E + + A L+LP ++T+  K   AE  I E+GL    NT +G    +G+SGG+++RVSI  E+L  P LL LDEPTSGLD+ A+  ++  +A L    HG G +T++ SI QP++ V
Sbjct:   82 TILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGSNL--TGKILINDGKITKQTLKRTGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGLTKCENTVVGNTFIRGISGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGL---AHGKG-KTVVTSIHQPSSRV 271          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.783e-34
Identity = 84/193 (43.52%), Postives = 126/193 (65.28%), Query Frame = 1
Query:   70 SILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNT-RQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPT 642
            +IL GLTG   P E+LA++GPSG G ++LL AL GR+G    +  G I  N +  + A   T+ +VTQDDAL   LTV+E + ++A L+LP++  K +K ++A+  + E+GL    +T IGG   +G+SGG+++RVSI  E+L  P LLFLDEPTSGLDS  +  ++S + +L +     G RT++ +I QP+
Sbjct:   65 TILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNKPLSKAVKRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGLDRCKDTIIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELAR-----GGRTVVTTIHQPS 252          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.200e-34
Identity = 83/197 (42.13%), Postives = 126/197 (63.96%), Query Frame = 1
Query:   70 SILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            ++L  +TG A   E+LA++G SG G STL+DALAGR+  ++ + G + +NG K     L    SAYV QDD L   LTV E + ++++ +LP ++ K +K ER E  I ++GL++A +T IG  G +G+SGG++RRVSI I+++  P LLFLDEPTSGLDS  ++ V+  + ++ Q         +I SI QP+  +
Sbjct:   90 TLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLK-GTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSVVIMSIHQPSARI 280          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34
Identity = 81/195 (41.54%), Postives = 126/195 (64.62%), Query Frame = 1
Query:   73 ILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            +L G++G A   E++A++G SG G STL+DALA R+   + + G+I +NG   + +L    SAYV QDD L   LTV E + +SA+ +LP +++K +KK R +  I ++GL++A  T IG  G +G+SGG++RRVSI  +++  P +LFLDEPTSGLDS ++Y V+  + ++ Q         +I SI QP+  +
Sbjct:  126 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLR-GDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQ-----SGSIVIMSIHQPSYRI 314          
BLAST of EY684693 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34
Identity = 84/206 (40.78%), Postives = 131/206 (63.59%), Query Frame = 1
Query:   49 GPTKGNG--SILAGLTGYAIPVELLAIMGPSGCGTSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQKDHGVGSRTIIPSIPQPTTEV 651
            G ++ NG  ++L  ++G A   ++LA++G SG G STL+DALAGR+   + + G + +NG K     L    SAYV QDD L   LTV E + ++++ +LP +++K +K ER E  I ++GL++A NT IG  G +G+SGG++RRVSI I+++  P +LFLDEPTSGLDS  ++ V+  + ++ Q         +I SI QP+  +
Sbjct:   89 GFSRQNGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLR-GSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSIVIMSIHQPSARI 288          
The following BLAST results are available for this feature:
BLAST of EY684693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
AB11G_ARATH3.056e-5753.88ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH1.202e-5351.39ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH2.266e-5250.00ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH4.274e-5147.42ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB14G_ARATH7.324e-3542.05ABC transporter G family member 14 OS=Arabidopsis ... [more]
AB25G_ARATH2.131e-3445.41ABC transporter G family member 25 OS=Arabidopsis ... [more]
AB9G_ARATH2.783e-3443.52ABC transporter G family member 9 OS=Arabidopsis t... [more]
AB18G_ARATH6.200e-3442.13ABC transporter G family member 18 OS=Arabidopsis ... [more]
AB20G_ARATH8.098e-3441.54ABC transporter G family member 20 OS=Arabidopsis ... [more]
AB19G_ARATH8.098e-3440.78ABC transporter G family member 19 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-D04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684693 ID=EY684693; Name=EY684693; organism=Citrus sinensis; type=EST; length=893bp
CTCGCCTCCGGCTTAGCTTGGACCGATCTGTGGGTTACCGCTCCCGATGG
CCCGACCAAAGGCAACGGATCAATCCTTGCAGGTCTTACTGGCTACGCCA
TACCTGTGGAGCTTTTGGCTATTATGGGTCCTTCTGGTTGTGGAACATCT
ACTCTTCTTGATGCTTTAGCTGGAAGACTAGGATCGAACACAAGGCAAGC
AGGAGAAATTCTAATTAATGGGCGCAAACGGGCACTGGCTTATGGAACCT
CGGCATATGTGACACAAGATGACGCTTTGATCACTACACTGACGGTTAGT
GAAGCAGTGTACTACTCAGCTCAGCTGCAATTGCCGGACACGATGACCAA
ATTACAGAAGAAAGAAAGAGCAGAAATGACAATAAAAGAAATGGGGCTCC
AAGATGCCATGAATACAAGAATTGGAGGCTGGGGAGCTAAAGGCCTTAGT
GGTGGTCAAAAGAGGAGAGTTAGCATTTGCATTGAAATGTTGACTCGACC
AAAGCTTCTATTTCTTGACGAGCCAACAAGCGGACTTGATAGTGCTGCTT
CATACTATGTAATGAGCAGGATTGCTAAGCTTGATCAAAAAGATCATGGA
GTGGGATCAAGAACAATAATACCATCCATCCCTCAACCTACCACCGAAGT
TTTTCCGCTTTTTTCACAACCTTTGCCCTTCTTTCTCCCGCCAAACTGGT
CTATTTTTGGTCCACGTTCCTGCCGGAAATGAACGTTTTTTCCTTTTAAA
TGGGATTCCCTTTGCCCCAACCCTCCCGAAATCCCCTCCAGTCCACTTTC
TTGAGGACTTTTAAACAAGCAAATTTCCACGGGGGCTATTCGGACCAAAG
TGTTTCCATAGCCTCTAATTCCCCCCCCCCACGACACCTGTGT
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