EY710187

Overview
NameEY710187
Unique NameEY710187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710187 vs. ExPASy Swiss-Prot
Match: SCC12_ARATH (Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana GN=SYN2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.910e-17
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 3 
Query:   96 KDEDFDLIFMNEES-NFGEVDRQESYGFSARTRMVAKYLHRRFSCHKERREDEAIKLLPLLEGRTVKETARIFYEILVLQTKGIVNVKQDDAYGDILVVKAPWWDQSC 416
            ++ D D I MN+E  N  E    +   +S+RTR VAK+L + F   +ER E+E + LL L  GRT KE+AR+FYE LVL+TKG V VKQ+  Y D+ +++     ++C
Sbjct:  703 ENRDLDTILMNDEQVNADERQDLQQETWSSRTRNVAKFLEKTFLEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMRVSRPQKAC 810
The following BLAST results are available for this feature:
BLAST of EY710187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SCC12_ARATH4.910e-1743.52Sister chromatid cohesion 1 protein 2 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-088-H07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710187 ID=EY710187; Name=EY710187; organism=Citrus sinensis; type=EST; length=1022bp
CAAGATCATTTGAGACTCCTGAAAATGCTCACTCAATTGCTGTAGAAACA
CTTGCTGATTCATATGCGACTCCTGAGAAAGATCTAGCTTCAAGCAAGGA
TGAAGATTTTGATCTCATTTTCATGAATGAGGAGTCAAATTTTGGTGAAG
TAGATAGGCAGGAATCATATGGATTTTCTGCAAGAACCAGAATGGTGGCA
AAGTACTTGCATAGAAGGTTCTCATGTCACAAGGAAAGAAGAGAGGATGA
AGCAATAAAATTGTTGCCGCTTTTGGAAGGAAGAACTGTGAAAGAAACTG
CAAGGATCTTTTATGAAATATTGGTGTTGCAAACAAAAGGGATAGTGAAT
GTGAAGCAAGATGATGCCTATGGTGACATACTTGTCGTGAAAGCTCCTTG
GTGGGACCAAAGCTGTGGAGCTCTTTAATCAGTGAAACCGCAAAGCCAAA
CAATAGTTTTTTGTTCAGAAATAGGATTCCAGAAGATGTCATCCTTGTCA
GTGTTAGTTGAGTTGAATAGGAAGTAAATGTAGTTTCTTTATACATGGAA
TTTCTGGATTTGGTTACCAGCAAATTGGGCCAATTTATCCGTAAGGTTGG
CTTTGGAAAAGGAATATGTGTCCGGGGAAGGTTACTAAACTTTTTCATAA
AAAACCGGTAAAAGGGTAAACCTGTTTCTTAAACAATTTTTTCCTTGATT
TTTTTTAGGAAAAGCCCTAACCCCCAAAAAAAGGGGTCTTGGATTGGGGG
GTAAAAAAAAAAACCACAAAAAGTTAGGAATAACTAATTTATACAAGATA
AAAGAGAAAAACCATCAGTACAATTTAATAAACAAAAACAAGATGGGGGG
GGGCGCCGCCCCTCAAAGAAAAAACCCAACCTTTTATCAACCGCCAGGGG
GCGGGGGCGCACACCCAACAAAATCCCCCCCCTTTTTAAATAGGGTGGGG
CCCACTACAAATATTTTTATATTTATTTCGCGGGGGGGGGCGGGGGCGCT
TTTTTTTTATTTTATAACATAC
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