EY684626

Overview
NameEY684626
Unique NameEY684626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:1010..1394. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.880e-18
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 167
            QEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  311 QEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.373e-18
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  310 QEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.163e-17
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  308 QEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.163e-17
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 164
            QEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  306 QEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.395e-17
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  306 QEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.046e-17
Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            QEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  287 QEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.203e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 161
            QEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  311 QEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16
Identity = 39/49 (79.59%), Postives = 46/49 (93.88%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 158
            QEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  310 QEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 3
Query:   15 EMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 155
            EMID AAKH +TA+IEVI  DYVNTAMERLAKADVRYRFVIDI NTL
Sbjct:  303 EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTL 349          
BLAST of EY684626 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 3
Query:   12 QEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 164
            QEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  312 QEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
The following BLAST results are available for this feature:
BLAST of EY684626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CADH6_ARATH4.880e-1882.69Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_APIGR6.373e-1887.50Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
MTDH_FRAAN3.163e-1787.50Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH7_ARATH3.163e-1780.39Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH5.395e-1787.50Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_PETCR7.046e-1781.25Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_MESCR9.203e-1782.00Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH9_ARATH2.050e-1679.59Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH5_ORYSJ1.017e-1585.11Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH3_STYHU2.960e-1572.55Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684626 ID=EY684626; Name=EY684626; organism=Citrus sinensis; type=EST; length=385bp
CCACGCGTCCGCAAGAGATGATTGATTTTGCAGCAAAACACAATATAACA
GCTGACATTGAGGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCG
GCTCGCCAAGGCTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACA
CCTTGGCCGCCACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTG
TCTTCAATTCACAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCT
CCCTCGATCATTACACTCTTTTAGCGCTTAAATTACTTTTAATTTCCAGT
TACATCACCCTAATTATGTCGTGATTGCCAAAAAACTATAAATGTTAATG
AAATAAAACATTGTTCATATAAAAAAAAAAAAAAA
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