EY684603

Overview
NameEY684603
Unique NameEY684603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig721 contig Csv1_Contig721:827..1422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 9.330e-44
Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 3
Query:    3 TRPRMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 329
            T  R    P GQIYGYRMSLWAEH+  ++DCF QPE++ECVRKVR++GE NW+QFAA++ S+MR HL+KYPVEVDRKGKVRP+PG ETFPDVGGNIVG+F AIQENLTI
Sbjct:  859 TWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.141e-41
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 3
Query:    3 TRPRMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 329
            T  R +  P GQIYGYRMSLWAEH+  ++DCF +PE+L CVRKVR+V E NW+QF +++ SEMR HL+KYPVEVDRKGKVRP+PG E FPDVGGN+VGSF AIQENLTI
Sbjct:  807 TWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.105e-36
Identity = 66/101 (65.35%), Postives = 85/101 (84.16%), Query Frame = 3
Query:   27 PYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 329
            P+GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E NW+Q+AA++ +EM  HL+KYPV+VDR GKV  +PG ETFPD+GG I+GSF A+QENLTI
Sbjct:  758 PHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.461e-36
Identity = 65/101 (64.36%), Postives = 84/101 (83.17%), Query Frame = 3
Query:   27 PYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 329
            P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E NW+Q+AA++ +EM  HL+KYPV+VDR GKV  +PGYETFPD+GG I+GSF  ++ENLTI
Sbjct:  766 PRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35
Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 3
Query:   27 PYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI 329
            P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E NW Q+AA++ +EM  HL+KYPV+VD+ GKV  +PG ETFPD+GG I+GSF  +QENLTI
Sbjct:  756 PRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 856          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30
Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 3
Query:   21 RHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSF-FAIQENLT 326
            RHP GQ+YGYRMSLWAEHLG   D F +P  LEC++KV ++ E NW++F     SE++ HLIKYP++VD  GKV P+P YETFPDVGG I+G+   A+ + LT
Sbjct:  765 RHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.472e-20
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG +ED F +PE++ECV+KV  V E  W  +++DD + ++  HL+ YP+ V   G V  +PG E FPD    ++G+
Sbjct:  712 GQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGN 801          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RM+LW EHLG ++D F +PE+LECV+KV  + E  W  +++DD Q ++  HL+ YP+ V   G V  +PG E FPD    ++G+
Sbjct:  712 GQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGA 801          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 37/90 (41.11%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQ+YG+RMSLW EHLG + D F +PE+ EC+ KV  + +  W  ++++  + ++  HL++YP+ V  +G+V  +PG+E FPD    I+G+
Sbjct:  709 GQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGA 798          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 35/90 (38.89%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQ++G+RMSLW EHLG +++ F  P +LEC+ KV  + +  W  ++++  + ++  HL++YP+ VD +G +  +PG+E FPD    I+G+
Sbjct:  712 GQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGN 801          
The following BLAST results are available for this feature:
BLAST of EY684603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PLDB1_ARATH9.330e-4473.39Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH1.141e-4170.64Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH1.105e-3665.35Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH2.461e-3664.36Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH6.062e-3563.37Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH7.668e-3057.28Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE2.472e-2046.67Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ9.395e-2045.56Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA1_VIGUN1.357e-1841.11Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA2_BRAOC3.022e-1838.89Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-B04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684603 ID=EY684603; Name=EY684603; organism=Citrus sinensis; type=EST; length=595bp
CCACGCGTCCGAGAATGAAACGTCATCCTTATGGACAGATCTATGGATAT
AGAATGTCGCTATGGGCAGAACATCTTGGATACATTGAGGACTGCTTCGG
ACAACCCGAGACTCTGGAATGTGTAAGAAAGGTTAGATCAGTAGGCGAGA
ATAACTGGCAGCAGTTTGCTGCAGATGATCAATCTGAAATGAGGAGCCAC
CTTATAAAGTACCCAGTTGAAGTGGATCGAAAAGGCAAGGTGAGGCCAAT
TCCAGGATATGAAACATTCCCAGACGTGGGAGGAAACATAGTTGGCTCAT
TTTTTGCCATTCAGGAGAATCTTACCATTTGAACAGTTACCGGAAGTTAC
AAGGTAAATAGTAAGAGATACATACAAATTTTGACATGTGTCATCAAAAA
CCCATGTTGATGTATAGCTTGTGTCTCCCTATGGGTATTAACATAGTTTG
ATAATCCCCTGATTTTGTAAATAAGTAGATATACAGTTAGAAAATCATGT
GTCTGTTTATTTGATTTTTAACTTTTATTTCCATTTTTGCATCTAATTAA
TGGCCCTTTGGCTTTCAATATTATTGTGGGTATTTGCAAGGAAAA
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