EY684593

Overview
NameEY684593
Unique NameEY684593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARFL_DANRE (Cytosolic Fe-S cluster assembly factor narfl OS=Danio rerio GN=narfl PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.244e-28
Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLHNW 378
            ++G+ LLKFA  YGF+N+QN+V+K+K  K  Y FVEVMACPSGCLNGGGQ+KP   QS KEL++ +E +Y  +   + P  +  V  LY  WLE  G EKA++ +HT+YH V K+       W
Sbjct:  290 KDGQVLLKFAAVYGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQLKPSADQSNKELLQQVEEVY-RSEHPSVPEDDSQVAELYQSWLESVGEEKARQLLHTQYHAVEKTANGLSIKW 411          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARFL_MOUSE (Cytosolic Fe-S cluster assembly factor NARFL OS=Mus musculus GN=Narfl PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26
Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLHNW 378
            REG+ LL+FA+ YGF+N+QN+V+K+K  +C Y +VEVMACPSGCLNGGGQ+K  P     EL++ LE +Y   V    P   P V+ LY  WL+   SE+A + +HT+YH V K  +     W
Sbjct:  356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLK-APDTEGSELLQQLERLY-SMVRTEAPEDAPGVQELYQHWLQGEDSERASRLLHTQYHAVEKPSSGLSIRW 476          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARFL_XENTR (Cytosolic Fe-S cluster assembly factor narfl OS=Xenopus tropicalis GN=narfl PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLHNW 378
            ++G  +L FAL YGF+N+QN+V+K+K  +C Y +VEVMACPSGCLNGGGQIK + G+  K+L++ +E +Y   V    P +   V  LY +WLE   S KA++ +HT+YH V K  +     W
Sbjct:  356 QDGNVVLHFALAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQIKAE-GEGSKDLLQRVEDLY-NTVRTERPEEREEVAQLYGDWLEDKDSAKARQALHTQYHAVEKINSGLTIKW 476          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARFL_BOVIN (Cytosolic Fe-S cluster assembly factor NARFL OS=Bos taurus GN=NARFL PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.042e-25
Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLHNW 378
            REG+ LL FA  YGF+N+QN+V+K+K  +C Y +VEVMACP+GCLNGGGQ+K  P    KEL++ +E +Y   V    P   P ++ LY+ WL+  GSE+A + +HT YH V K+ +     W
Sbjct:  356 REGQVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLK-APDMPGKELLQQVERLY-GLVRTEAPEDAPGIQELYERWLQGAGSERAGRLLHTSYHAVEKAGSGLSIRW 476          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARFL_RAT (Cytosolic Fe-S cluster assembly factor NARFL OS=Rattus norvegicus GN=Narfl PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVK 351
            REG+ LL+FA+ YGF+N+QN+V+K+K  +C Y +VEVMACPSGCLNGGGQ+K  P    +EL++ +E +Y   V    P   P V+ LY  WL+   SE+A   +HT+YH V K
Sbjct:  356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLK-APDTEGRELLQQVERLY-SMVRTEAPEDAPGVQELYQHWLQGEDSERASHLLHTQYHAVEK 467          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARF_DROME (Probable cytosolic Fe-S cluster assembly factor CG17683 OS=Drosophila melanogaster GN=CG17683 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 58/125 (46.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKC-DYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLH-NW 378
            + GKT+LKFA+  GF+N+QN+V+K+K  K  +Y FVEVMACPSGC+NGG QI+P  GQ  +EL + LE +Y +N+  ++P +N L + +Y+++L+   S+K+   +HT YH VV  ++  L+ NW
Sbjct:  355 QNGKTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVRELTRKLEELY-QNLPRSEP-ENSLTKHIYNDFLDGFQSDKSYDVLHTRYHDVVSELSISLNINW 477          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARF_DROSE (Probable cytosolic Fe-S cluster assembly factor GM20417 OS=Drosophila sechellia GN=GM20417 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.757e-25
Identity = 57/125 (45.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKC-DYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLH-NW 378
            + GKT+LKFA+  GF+N+QN+V+K+K  K  +Y FVEVMACPSGC+NGG QI+P  GQ  +EL + LE +Y  N+  ++P +N L + +Y+++L+   ++K+ + +HT YH VV  ++  L+ NW
Sbjct:  355 QNGKTVLKFAIANGFRNIQNLVQKLKREKLSNYHFVEVMACPSGCINGGAQIRPTTGQHVRELTRKLEELY-HNLPRSEP-ENSLTKHIYNDFLDGFQTDKSYEMLHTRYHDVVSDLSISLNINW 477          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARF_DROYA (Probable cytosolic Fe-S cluster assembly factor GE22682 OS=Drosophila yakuba GN=GE22682 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 58/125 (46.40%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKC-DYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLH-NW 378
            + G T+LKFA+  GF+N+QN+V+K+K  K  +Y FVEVMACPSGC+NGG QI+P  GQ  +EL + LE +Y  N+ L++P +N L + +Y ++L+   +EK+ + +HT YH VV  ++  L+ NW
Sbjct:  355 KNGNTVLKFAIANGFRNIQNMVQKLKRGKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVRELTRKLEELY-HNLPLSEP-ENSLTKHIYKDFLDGFQTEKSYELLHTSYHDVVSELSISLNINW 477          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARF_DROSI (Probable cytosolic Fe-S cluster assembly factor GD17698 OS=Drosophila simulans GN=GD17698 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 57/125 (45.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   10 REGKTLLKFALCYGFQNLQNIVRKVKMRKC-DYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPGSEKAKKHVHTEYHPVVKSITAQLH-NW 378
            + GKT+LKFA+  GF+N+QN+V+K+K  K  +Y FVEVMACPSGC+NGG QI+P  GQ  +EL + LE +Y  N+  ++P +N L + +Y+++L+   ++K+ + +HT YH VV  ++  L+ NW
Sbjct:  355 QNGKTVLKFAIANGFRNIQNLVQKLKREKLSNYHFVEVMACPSGCINGGAQIRPTTGQHVRELTRKLEELY-HNLPRSEP-ENSLTKHIYNDFLDGFQTDKSYEVLHTRYHDVVSDLSISLNINW 477          
BLAST of EY684593 vs. ExPASy Swiss-Prot
Match: NARF_AEDAE (Probable cytosolic Fe-S cluster assembly factor AAEL012261 OS=Aedes aegypti GN=AAEL012261 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 55/122 (45.08%), Postives = 83/122 (68.03%), Query Frame = 1
Query:   16 GKTLLKFALCYGFQNLQNIVRKVKMRKCDYQFVEVMACPSGCLNGGGQIKPKPGQSPKELIKTLETIYLENVMLADPFKNPLVRSLYDEWLEQPG-SEKAKKHVHTEYHPVVKSITAQLHNW 378
            G+ LL+FA+  GF+N+QN+V+K+K  KC+Y F+E+MACPSGCLNGG Q++P  GQ+P+EL   LE +Y + +  ++P +N  V  +Y  +L+  G + K K+ +HT YH + K  TA    W
Sbjct:  359 GEVLLRFAIANGFRNIQNMVQKLKRGKCNYHFIEIMACPSGCLNGGAQVRPNSGQTPRELTAELEAMY-KMLPQSNP-ENEAVEMVYTTFLDNAGDNNKRKEFLHTSYHQIEKMNTALNIKW 478          
The following BLAST results are available for this feature:
BLAST of EY684593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
NARFL_DANRE2.244e-2849.59Cytosolic Fe-S cluster assembly factor narfl OS=Da... [more]
NARFL_MOUSE2.743e-2647.97Cytosolic Fe-S cluster assembly factor NARFL OS=Mu... [more]
NARFL_XENTR7.982e-2646.34Cytosolic Fe-S cluster assembly factor narfl OS=Xe... [more]
NARFL_BOVIN1.042e-2547.15Cytosolic Fe-S cluster assembly factor NARFL OS=Bo... [more]
NARFL_RAT1.362e-2550.00Cytosolic Fe-S cluster assembly factor NARFL OS=Ra... [more]
NARF_DROME3.961e-2546.40Probable cytosolic Fe-S cluster assembly factor CG... [more]
NARF_DROSE6.757e-2545.60Probable cytosolic Fe-S cluster assembly factor GM... [more]
NARF_DROYA8.825e-2546.40Probable cytosolic Fe-S cluster assembly factor GE... [more]
NARF_DROSI8.825e-2545.60Probable cytosolic Fe-S cluster assembly factor GD... [more]
NARF_AEDAE8.825e-2545.08Probable cytosolic Fe-S cluster assembly factor AA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-A05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684593 ID=EY684593; Name=EY684593; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGGGAGGGAAAAACGTTGTTGAAATTTGCCCTATGTTATGG
CTTCCAGAACCTGCAAAACATTGTCAGGAAAGTGAAAATGCGAAAATGCG
ATTATCAATTTGTGGAGGTCATGGCATGCCCTTCAGGTTGCTTGAATGGT
GGAGGTCAGATCAAGCCTAAGCCAGGGCAATCACCGAAGGAGTTGATTAA
GACACTGGAAACCATCTATTTGGAAAATGTAATGCTAGCTGATCCTTTCA
AAAATCCTCTGGTGAGAAGCTTGTATGATGAGTGGCTTGAGCAACCTGGT
TCAGAGAAAGCTAAAAAGCACGTGCACACAGAATACCATCCTGTAGTGAA
AAGTATCACTGCTCAGTTGCATAATTGGTGAAAGCATTTACCATCCCAAC
ACTTGATCGTATACAAATTTGGAACTATAGAACTCTCTTCTTGTGCCCCA
TGCCGTCTCCAAGTTGTTTTAGCAATTTCAGACATGGCACCACAGCGATG
CTGGCCATTTTTTGTCAATCATGGGATTGCATTTGCAGGGGAGTCCAATT
TTGATAGGGTAAACATATATTTATTTACTTCAAAGGTTTTCACTCATGTA
CATACTCTGTATTAGAAATGTTACATATAAAAGAAAGCATTGAGTTAGAC
ACTGATGCGTCATGGCACTTAATTTCATTTCCCTTGGGTCATTTTTTCTT
AGTTGAAAAGGCCCGATAAGGGTCCCTTTGGCTCCTGTACATAAGCATTT
ATTTTGGAAACCTGAAACTCCCCATTTTTGGTAGGGAAAATTGGAATTTT
TGGGGGAATGGTGTGGCCTTGACCCTGGAAAACAAAAAAATGGTCCTTGG
TTGTTCGCCAACCTCCCCCCGGGGGTGAAAGCAT
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