EY684511

Overview
NameEY684511
Unique NameEY684511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684511 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 2 
Query:   65 SRRTLVRDIYQLYLAEKAALKNMFIASKYRVSITTDTWTSIQNFNYMVVTAHWVDPNWKLQKRILNFFQITS-HKGDSIGKLIEKCLLDWGIE-KVMTVTVDNASANDVAVNYLKKKLKNWKGDAMILDGDCLHLRCCAHIVNLIGTEGLKKMHDSIASIPNAIMYVRAS 568
            SR T  + I  LYL EK  L       + R S T D WTS QN +YM VT HW+D +W LQKRI+ FF +   H G  + +     ++ W IE K+  +++DNASAN+VAV+ + + L++   + ++ DG   H+RC  HI+NL+  +GL  +  +I  I   ++ V++S
Sbjct:  211 SRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSN-LVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSS 379
[Close]
BLAST of EY684511 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 4.169e-26
Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 2 
Query:   65 SRRTLVRDIYQLYLAEKAALKNMFIASKYRVSITTDTWTSIQNFNYMVVTAHWVDPNWKLQKRILNFFQITS-HKGDSIGKLIEKCLLDWGIE-KVMTVTVDNASANDVAVNYLKKKLKNWKGDAMILDGDCLHLRCCAHIVNLIGTEGLKKMHDSIASIPNAIMYVRAS 568
            SR T  + I  LYL EK  L       + R S T D WTS QN +YM VT HW+D +W LQKRI+ FF +   H G  + +     ++ W IE K+  +++DNASAN+VAV+ + + L++   + ++ DG   H+RC  HI+NL+  +GL  +  +I  I   ++ V++S
Sbjct:  266 SRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSN-LVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSS 434
The following BLAST results are available for this feature:
BLAST of EY684511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRAC9_MAIZE4.169e-2638.24Putative AC9 transposase OS=Zea mays PE=4 SV=1[more]
TRA1_MAIZE4.169e-2638.24Putative AC transposase OS=Zea mays PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684511 ID=EY684511; Name=EY684511; organism=Citrus sinensis; type=EST; length=977bp
GGAAGTAGAGTCTTATGGGTTTCATCTTTTGTGCGATAAACTTTGTCTTA
GATTTGGCCCTCCTTCTAGGAGAACACTTGTTAGAGATATATATCAATTG
TATTTAGCTGAGAAGGCAGCATTGAAAAATATGTTTATTGCAAGTAAGTA
TAGAGTTTCTATTACTACAGACACTTGGACTTCCATACAAAATTTTAATT
ATATGGTTGTGACAGCCCATTGGGTTGATCCTAATTGGAAATTACAGAAG
AGGATTTTGAATTTTTTCCAAATAACAAGCCACAAAGGGGATTCAATTGG
CAAGCTCATTGAAAAATGCTTGCTTGATTGGGGTATAGAAAAAGTGATGA
CTGTTACAGTTGATAATGCGAGTGCTAATGATGTTGCTGTTAATTATTTG
AAAAAGAAGTTGAAAAATTGGAAGGGCGATGCAATGATTTTAGATGGAGA
TTGTTTACATTTACGTTGTTGTGCCCATATTGTTAATTTGATTGGGACTG
AAGGGCTTAAAAAGATGCATGACTCCATTGCTAGCATTCCCAATGCAATT
ATGTATGTGAGGGCCTCCGGGTTTGAGGTTGCTTAAATTTTAATCCAGGG
GTTGAGAAAGAAAAAAATTGAAAATAAAGGGACTTTTAACCTAATTGATG
GGGCCCACTAAATGGATTTTCACCCTACCCTTGGTTGGCAAAAGCCCATA
CACCTTCCCAAAAGGCTTTTTGAAAAGGCCTCAAAAAAAAAGGAAAATGG
AGGGACCCCTATTGGAATTTTTTTTTAAAGGAAAAGAAAGGGAAAAAAAA
AAAAAAGGGGCCCCCCCCCGGGGGAAAAAAATGGAAAAAAAAGGCCGAAA
AAATTATTAATTGGGAGTTTTTAAAAAAATTTTTTCAAGAGAGAGGAACA
GGGATGGAGATTTCTGGGGGCGCCCCTTTTAAAGCGGAGATAAAACCCTA
AACCAATTTGGAAATTTTGTTACACCC
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