EY684510

Overview
NameEY684510
Unique NameEY684510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684510_ssr858 microsatellite EY684510_ssr858:858..867. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY684510 vs. ExPASy Swiss-Prot
Match: ZDH24_ARATH (Probable S-acyltransferase At5g50020 OS=Arabidopsis thaliana GN=At5g50020 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.702e-22
Identity = 68/151 (45.03%), Postives = 86/151 (56.95%), Query Frame = 1 
Query:    1 RGCVNTFLEVFCTKVKTSRTNFRAFVQEEVPR-----TSLPRTPEA-EDLGGDPRSKVEDDLEIGEDLLKISQRRNIEEIDEDIRSRGSNGHPHNTSEVDSVLGSDIRAPTIRSETRHXXXXXXXXXXEISPEVLANSTVTESRGYGAPKE 435
            RGC N F E FC+KVK SR +FRAF++EE PR     T+  R  EA E+   + R KVEDDL+I ED++K+ QR N EE        GS+   H        +GS+ RAPTIRSE RH          E   +V+A S+V ESR Y A +E
Sbjct:  265 RGCSNNFFETFCSKVKPSRNDFRAFIKEEPPRNITLATTWERPEEADEENREERRQKVEDDLDIDEDVMKLQQRLNDEE--------GSDTAHHKIDIDQMRIGSNERAPTIRSEARHGNWGARSNAQE--EDVIAGSSVRESRSYAAAEE 405
[Close]
BLAST of EY684510 vs. ExPASy Swiss-Prot
Match: ZDH19_ARATH (Probable S-acyltransferase At4g24630 OS=Arabidopsis thaliana GN=At4g24630 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.863e-22
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:    1 RGCVNTFLEVFCTKVKTSRTNFRAFVQEEVPRT-SLPRTP----EAEDLGGDPRSKVEDDLEIGEDLLKISQRRNIEEIDEDIRSRGSNGHPHNTSEVDSVLGSDIRAPTIRSETRHXXXXXXXXXXEISPEVLANSTVTESRGYGAPKE 435
            RGC N FLEVFC+KVK SR NFRAF++EE PR  +LP T     EAED     R KVEDDL+IG+DL+ +S+R N E+         +N  PH+T ++D       RA +IR+E RH          ++     A + V ESR Y   K+
Sbjct:  273 RGCPNNFLEVFCSKVKPSRNNFRAFIEEEPPRVITLPSTTRESGEAEDENVTRRQKVEDDLDIGDDLMNLSRRCNAED--------ANNNQPHHTLDIDHE-----RAGSIRTEARHESWGRRSGSWDV-----AATDVRESRSYATAKD 404
The following BLAST results are available for this feature:
BLAST of EY684510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZDH24_ARATH2.702e-2245.03Probable S-acyltransferase At5g50020 OS=Arabidopsi... [more]
ZDH19_ARATH7.863e-2243.33Probable S-acyltransferase At4g24630 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-H07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684510 ID=EY684510; Name=EY684510; organism=Citrus sinensis; type=EST; length=954bp
CGGGGTTGCGTGAACACTTTTCTTGAAGTGTTTTGTACAAAGGTAAAAAC
CTCAAGGACCAACTTCCGGGCTTTTGTTCAAGAGGAGGTACCAAGGACTT
CTTTGCCCCGTACTCCAGAAGCAGAAGATTTGGGTGGAGATCCACGTTCA
AAGGTTGAAGATGATCTAGAGATTGGTGAAGATTTGTTGAAGATTTCCCA
GCGTCGAAACATTGAAGAAATTGATGAGGACATTCGGAGCAGAGGGAGCA
ATGGTCATCCCCACAATACCTCGGAGGTCGACTCTGTTTTGGGTTCAGAT
ATTCGAGCTCCTACCATTCGATCAGAAACTCGGCATTCAAGTTGGGGAAG
GAGAAGTGGCAGCTGGGAAATTTCACCTGAGGTTCTTGCCAACTCCACGG
TGACTGAGAGCAGAGGCTATGGCGCTCCAAAGGAAGCAAACCAATGATGG
GATATTCAACTTGATCTTATTATTAGTACCCGTTACTGAATTACATGAAT
GGTGCACAATTTAACTTGACCTGTTTTCCTCGTTTTTTCCAAGTAAGTGG
CCGGTGCTTTTTAATTTTATGGTTACTCCGGGGGGGAGGCAAATTTACCC
CTCTCCCAAGGGAAAAAAGGGTGAATTTACCTTTTAATTTTGGGGAAACC
AATTGGGTAGGGATGGGGTGGTTTGAAATTGTTTTGAAAAGAAAGGGGAA
AGGGGAAAAAGGAACTTGGCCGGGTATTAAGTCTCCCCCTCTTTTTATGG
GTTCCAAAAATTTTTCAAAAAACCTGGGGAATTTGAAAATCTGGGGGGGG
GGGTTTTATTTCCTTGTGGGGGAAATATGGGGCCCCCCCAAGATTTTCCG
GGGATTTTGTGTGTGTGGAGAACAGGGGGGAATAAGAAATCCCTTTTTTT
TTTTTTTTAGAACGAGGAACAATGTGCCGAGGATGTGAAAAGGAACTCCT
GTAA
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