EY684504

Overview
NameEY684504
Unique NameEY684504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.307e-46
Identity = 110/190 (57.89%), Postives = 125/190 (65.79%), Query Frame = 3
Query:   27 ALADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLIKQKGSNFGEHNE-----ILHGF**SQHLEVAETLCPLPKTWGRGPQPLGPNF 581
            ALADRLS IVQN++LTVTA  +AF  SWR            I A + EQLFLKGFGGDY RAYSRATSVAREAIANIRTVAAYG EK+IS QF  ELS+P K A +RGHISGFGYG+SQ L+ C    LGLWY SVLI  K +NFG+  +     I+  F       V+ETL   P    +G Q LG  F
Sbjct:  797 ALADRLSTIVQNLSLTVTALALAFFYSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAYSRATSVAREAIANIRTVAAYGAEKQISEQFTCELSKPTKNAFVRGHISGFGYGLSQFLAFCSYA-LGLWYVSVLINHKETNFGDSIKSFMVLIVTAF------SVSETLALTPDI-VKGTQALGSVF 978          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.086e-44
Identity = 104/185 (56.22%), Postives = 124/185 (67.03%), Query Frame = 3
Query:   27 ALADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLIKQKGSNFGEHNEILHGF**SQHLEVAETLCPLPKTWGRGPQPLGPNF 581
            A+ADRLS IVQN++LT+TA  +AF  SWR            I A + EQLFLKGFGGDY RAYSRATS+AREAI+NIRTVAA+  EK+IS QF  ELS+P K ALLRGHISGFGYG+SQ L+ C    LGLWY SVLIK+  +NF +  +       + +  VAETL   P    +G Q LG  F
Sbjct:  799 AIADRLSTIVQNLSLTITALALAFFYSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAYSRATSLAREAISNIRTVAAFSAEKQISEQFTCELSKPTKSALLRGHISGFGYGLSQCLAFCSYA-LGLWYISVLIKRNETNFEDSIKSFMVLLVTAY-SVAETLALTPDI-VKGTQALGSVF 980          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB2B_ARATH (ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.700e-25
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = 3
Query:   30 LADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTH-LGLWYASVLIKQKGSNF 461
            + DR +I++QN+ L VT+F+IAFIL+WR            I   ++E+LF++G+GGD N+AY +A  +A E+++NIRTVAA+  E++I   ++ EL +P+K +  RG I+G  YGVSQ     F ++ L LWY S L+ +  + F
Sbjct:  786 VVDRSTILLQNLGLVVTSFIIAFILNWRLTLVVLATYPLVISGHISEKLFMQGYGGDLNKAYLKANMLAGESVSNIRTVAAFCAEEKILELYSRELLEPSKSSFRRGQIAGLFYGVSQF--FIFSSYGLALWYGSTLMDKGLAGF 928          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB1B_ARATH (ABC transporter B family member 1 OS=Arabidopsis thaliana GN=ABCB1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.343e-24
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 3
Query:   27 ALADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLIKQKGSNFGE 467
            A+ DR+S+IVQN AL + A    F+L WR            + A V +++F+ GF GD   A+++ T +A EAIAN+RTVAA+  E +I   + + L  P K+   +G I+G GYGV+Q   L     LGLWYAS L+K   S+F +
Sbjct:  816 AIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYTANLEPPLKRCFWKGQIAGSGYGVAQ-FCLYASYALGLWYASWLVKHGISDFSK 961          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB10B_ARATH (ABC transporter B family member 10 OS=Arabidopsis thaliana GN=ABCB10 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.652e-23
Identity = 54/145 (37.24%), Postives = 97/145 (66.90%), Query Frame = 3
Query:   30 LADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTH-LGLWYASVLIKQKGSNF 461
            + DR +I+++N+ L VTAF+I+FIL+WR            I   ++E++F++G+GG+ ++AY +A  +A E+I+NIRTV A+  E+++   ++ EL +P++++  RG ++G  YGVSQ     F ++ L LWY S+L+++  S+F
Sbjct:  778 VVDRSTILLENLGLVVTAFIISFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKAYLKANMLAGESISNIRTVVAFCAEEKVLDLYSKELLEPSERSFRRGQMAGILYGVSQF--FIFSSYGLALWYGSILMEKGLSSF 920          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.932e-22
Identity = 57/147 (38.78%), Postives = 90/147 (61.22%), Query Frame = 3
Query:   27 ALADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLIKQKGSNFGE 467
            A+A+R+S+I+QN+   +T+F++AFI+ WR            + A  A+QL LKGF GD  +A+++ + +A E ++NIRTVAA+  + +I   F  EL  P K++L R   SGF +G+SQ L+L     L LWY + L+ +  S F +
Sbjct:  803 AIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQSKILSLFCHELRVPQKRSLYRSQTSGFLFGLSQ-LALYGSEALILWYGAHLVSKGVSTFSK 948          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB11B_ARATH (ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.542e-13
Identity = 45/142 (31.69%), Postives = 70/142 (49.30%), Query Frame = 3
Query:   30 LADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXX-IGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLIKQKG 452
            + D LS+ VQNVA   +  +IAF  SW              I  FV  + F+KGF  D    Y  A+ VA +A+ +IRTVA++  E+++   +  +   P K  + +G ISG G+G S  +  C   +   +YA   + + G
Sbjct:  826 VGDALSLAVQNVASAASGLIIAFTASWELALIILVMLPLIGINGFVQVK-FMKGFSADAKSKYEEASQVANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGFSFFILFC--VYATSFYAGARLVEDG 964          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB9B_ARATH (ABC transporter B family member 9 OS=Arabidopsis thaliana GN=ABCB9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = 3
Query:   30 LADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLL-----SLCFLTHLGL 419
            + D L++IVQN+A   T  +IAF  +W             +    A+  FL GF  D    Y  A+ VA +A+++IRTVA++  E+++   +  +   P K  +  G +SG G+G S         +CF++  GL
Sbjct:  829 VGDALALIVQNIATVTTGLIIAFTANWILALIVLALSPFIVIQGYAQTKFLTGFSADAKAMYEEASQVANDAVSSIRTVASFCAEEKVMDLYQQKCDGPKKNGVRLGLLSGAGFGFSFFFLYCINCVCFVSGAGL 963          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: ABCB2_DICDI (ABC transporter B family member 2 OS=Dictyostelium discoideum GN=abcB2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.592e-12
Identity = 42/136 (30.88%), Postives = 66/136 (48.53%), Query Frame = 3
Query:   33 ADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLLSLCFLTHLGLWYASVLI 440
            + RL +++QN+   V   VIAF+  W+              A   E  F +GF      AY+    VA EAI  IRTV+++  E +I  +F   L +P + +  + ++SG  +G SQ  +L F+  L  WY   L+
Sbjct:  919 SQRLGLLIQNIVTIVAGLVIAFVSGWKLTLVVLACVPVIGFAGKVEMDFFQGFSQKGKEAYAECGQVASEAIGGIRTVSSFTCENKILEKFRQCLQKPIQMSFRKSNVSGLSFGFSQ-CTLFFIYTLTYWYGGKLV 1053          
BLAST of EY684504 vs. ExPASy Swiss-Prot
Match: AB7B_ARATH (ABC transporter B family member 7 OS=Arabidopsis thaliana GN=ABCB7 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.592e-12
Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 3
Query:   30 LADRLSIIVQNVALTVTAFVIAFILSWRXXXXXXXXXXXXIGAFVAEQLFLKGFGGDYNRAYSRATSVAREAIANIRTVAAYGIEKRISIQFASELSQPNKQALLRGHISGFGYGVSQLL-----SLCFLTHLGLWYASVLIKQKGSNFGEHNEI 479
            + D L +I+QN+A  + AF+IAF  +W                   +  F+ GFG      Y  A+ VA +A+++IRTVA++  E ++   +  +  +P +Q    G +SG  YG S L      S+CFL   G W    LI+ + + FGE  ++
Sbjct:  799 VGDVLGLIMQNMATIIGAFIIAFTANWLLALMALLVAPVMFFQGYYQIKFITGFGAKARGKYEEASQVASDAVSSIRTVASFCAEDKVMDLYQEKCDEPKQQGFKLGLVSGLCYGGSYLALYVIESVCFLG--GSW----LIQNRRATFGEFFQV 947          
The following BLAST results are available for this feature:
BLAST of EY684504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
AB13B_ARATH1.307e-4657.89ABC transporter B family member 13 OS=Arabidopsis ... [more]
AB14B_ARATH2.086e-4456.22ABC transporter B family member 14 OS=Arabidopsis ... [more]
AB2B_ARATH3.700e-2541.38ABC transporter B family member 2 OS=Arabidopsis t... [more]
AB1B_ARATH5.343e-2440.82ABC transporter B family member 1 OS=Arabidopsis t... [more]
AB10B_ARATH2.652e-2337.24ABC transporter B family member 10 OS=Arabidopsis ... [more]
AB19B_ARATH2.932e-2238.78ABC transporter B family member 19 OS=Arabidopsis ... [more]
AB11B_ARATH5.542e-1331.69ABC transporter B family member 11 OS=Arabidopsis ... [more]
AB9B_ARATH2.750e-1230.37ABC transporter B family member 9 OS=Arabidopsis t... [more]
ABCB2_DICDI3.592e-1230.88ABC transporter B family member 2 OS=Dictyostelium... [more]
AB7B_ARATH3.592e-1230.32ABC transporter B family member 7 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-G12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684504 ID=EY684504; Name=EY684504; organism=Citrus sinensis; type=EST; length=1013bp
TGCAGATGCAACCTTAGTACCACCTTGCTCTGGCTGACCGCCTCTCAATA
ATTGTGCAGAATGTCGCTCTCACAGTGACTGCATTTGTCATAGCCTTTAT
ACTAAGTTGGCGCTTGGCAGCTGTTGTCGCTGCCTCCTTGCCCCTGCTCA
TTGGAGCTTTCGTGGCTGAGCAACTTTTTCTTAAAGGCTTTGGAGGAGAT
TACAACAGAGCCTACTCTAGAGCAACTTCTGTAGCACGTGAAGCAATTGC
TAATATACGAACAGTTGCTGCATATGGCATTGAAAAACGAATTTCGATCC
AGTTTGCCTCAGAACTAAGCCAACCCAACAAGCAAGCACTTTTGCGAGGC
CACATATCAGGATTCGGCTATGGTGTGTCACAGTTGCTGTCTCTGTGTTT
CCTAACGCACTTGGGGCTTTGGTATGCATCAGTTCTTATCAAGCAAAAAG
GCTCCAACTTTGGCGAACATAATGAAATCCTTCATGGTTTTTGATAATCC
CAGCACCTGGAAGTAGCTGAAACACTTTGCCCTTTGCCCAAAACTTGGGG
AAGGGGTCCCCAGCCACTTGGGCCCAATTTTTTGGGCGATCCCCTACAAA
AAGAACAGCAAAACAACCTAAATGAATCTGCCATCAAAAAAGGGTAACTG
AAATCCAAGGGGAAAACATAAAATTCCAAAAATGGTAGATTTTCCAGGAA
CCCCTGGGGAGGGCTTGGCTTTCTCAATTTTTTGAAAAAATATTAATTCC
TCAAAAGTTTTTCACGTTGGGGGGGGAAAGCATTGGCAAAAAAGAGGGAC
CAAGAGGGGGGCAGAGGGAAAAGGTTACAGGGGAAATCTTCCCTCTTACT
TTAGTAATAGATTATGGAACCCCCACATTTTGTGGGAATAACGGGAATTC
AAAAATATGGGGGTAAAAGAAACAACTTAATACAGATTAAATGAAAAATG
TATATAAAGAACTGACACAAAAAAACTGGAAACAACAAATATTCATTTCT
TCTATTTTATTTG
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