EY684498

Overview
NameEY684498
Unique NameEY684498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684498_ssr220 microsatellite EY684498_ssr220:220..231. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 3.338e-66
Identity = 104/129 (80.62%), Postives = 121/129 (93.80%), Query Frame = 1
Query:  157 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGD+EQRVNLWFDP+ DYH Y ILW
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILW 159          

HSP 2 Score: 41.5874 bits (96), Expect = 3.338e-66
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 2
Query:  554 HIVFYVDDVPIRGYKNSWKGSFSHEPPHG-GVYFNPWGKPKEWGTKRVVQK 703
            HIVFYVDDVPIR YKN+   + ++      GVY   W +  +W T+  ++K
Sbjct:  163 HIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLW-EADDWATRGGLEK 212          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 2.770e-62
Identity = 100/129 (77.52%), Postives = 118/129 (91.47%), Query Frame = 1
Query:  157 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGD+EQRVNLWFDP+ D+H Y I W
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISW 158          

HSP 2 Score: 35.8094 bits (81), Expect = 2.770e-62
Identity = 24/57 (42.11%), Postives = 32/57 (56.14%), Query Frame = 2
Query:  539 SGNLHHIVFYVDDVPIRGYKN--SWKGSFSHEPPHGGVYFNPWGKPKEWGTKRVVQK 703
            S N   IVFYVD+VPIR YKN  + K  +    P  GVY   W +  +W T+  ++K
Sbjct:  157 SWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPM-GVYSTLW-EADDWATRGGIEK 211          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.240e-43
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGD+EQR+ LWFDP   YH Y +LW
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLW 155          

HSP 2 Score: 31.187 bits (69), Expect = 1.240e-43
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            N   IV +VDDVPIR +KNS
Sbjct:  156 NTFQIVIFVDDVPIRAFKNS 175          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.745e-43
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGD+EQR+ LWFDP   YH Y +LW
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLW 154          

HSP 2 Score: 34.2686 bits (77), Expect = 2.745e-43
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            N++ IVFYVDD PIR +KNS
Sbjct:  155 NMYQIVFYVDDYPIRVFKNS 174          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 7.918e-43
Identity = 69/128 (53.91%), Postives = 94/128 (73.44%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILWKP 549
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGD+EQ+ +LWFDP AD+H Y +LW P
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNP 155          

HSP 2 Score: 34.6538 bits (78), Expect = 7.918e-43
Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKN 601
            N HHIVF VDD+P+R +KN
Sbjct:  154 NPHHIVFMVDDIPVREFKN 172          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.031e-42
Identity = 72/125 (57.60%), Postives = 93/125 (74.40%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGD+EQR+ LWFDP  DYH Y +LW
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLW 155          

HSP 2 Score: 31.5722 bits (70), Expect = 1.031e-42
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            NL+ I F+VDD PIR +KNS
Sbjct:  156 NLYMIAFFVDDTPIRVFKNS 175          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.031e-42
Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGD+EQR+ LWFDP  +YH Y ILW
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILW 156          

HSP 2 Score: 34.2686 bits (77), Expect = 1.031e-42
Identity = 18/53 (33.96%), Postives = 27/53 (50.94%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNSWKGSFSHEPPHGGVYFNPWGKPKEWGTKRVVQK 703
            NL+ IVF+VD+VPIR +KNS               +N      +W T+  ++K
Sbjct:  157 NLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEK 209          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.344e-42
Identity = 71/125 (56.80%), Postives = 92/125 (73.60%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G++EQR+NLWFDP+ DYH Y +LW
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLW 155          

HSP 2 Score: 34.6538 bits (78), Expect = 1.344e-42
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            N++ IVF+VDDVPIR +KNS
Sbjct:  156 NMYQIVFFVDDVPIRVFKNS 175          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 8.572e-42
Identity = 69/125 (55.20%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  169 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG++EQR+ LWFDP   YH Y +LW
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLW 156          

HSP 2 Score: 31.187 bits (69), Expect = 8.572e-42
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNS 604
            N + IV +VDDVPIR +KNS
Sbjct:  157 NTYLIVIFVDDVPIRAFKNS 176          
BLAST of EY684498 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.053e-40
Identity = 71/128 (55.47%), Postives = 88/128 (68.75%), Query Frame = 1
Query:  166 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDKEQRVNLWFDPAADYHLYPILW 543
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G++E R +LWFDP  DYH Y ILW
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILW 151          

HSP 2 Score: 33.4982 bits (75), Expect = 2.053e-40
Identity = 21/57 (36.84%), Postives = 30/57 (52.63%), Query Frame = 2
Query:  545 NLHHIVFYVDDVPIRGYKNSWK----GSFSHEPPHGGVYFNPWGKPKEWGTKRVVQK 703
            N H +VF+VD VPIR YKNS K      F ++ P     F+      +W T+  ++K
Sbjct:  152 NNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPM--YLFSSIWNADDWATRGGLEK 206          
The following BLAST results are available for this feature:
BLAST of EY684498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH3.338e-6680.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.770e-6277.52Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.240e-4357.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN2.745e-4360.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH7.918e-4353.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.031e-4257.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.031e-4259.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.344e-4256.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC8.572e-4255.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH2.053e-4055.47Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-G05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684498 ID=EY684498; Name=EY684498; organism=Citrus sinensis; type=EST; length=994bp
TACATAACCACAACATATAATTAAAGTTCTCTTTCTAATTAGTAACAGAT
AATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATG
CAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTT
TTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGA
TGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAG
ACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGG
CGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGT
CACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTG
ATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACC
AATATCTATGCAAATGGAAAAGGCGATAAAGAACAGAGAGTGAACCTCTG
GTTTGACCCTGCTGCAGATTATCACCTTTACCCTATTCTCTGGAAACCTT
CACCATATTGTCTTCTATGTGGATGATGTGCCCATCCGGGGTTACAAAAA
CAGTTGGAAAGGCTCCTTTTCCCATGAACCACCCCATGGGGGGGTGTATT
TCAACCCTTGGGGGAAACCAAAAGAATGGGGCACAAAAAGGGTGGTCCAA
AAAAAAAAAAAATTGGGAGCCAAGCCTCCCTTTTTTTTTGCTTATTTCAA
AAAATTTTTAATTTTTGGGGGGTGGCCCCTTTCCCGGGACACACCAAACT
GGGCCTCCCAACCCCCGGAAAACGGGGGGGGGGAGGAAAAAAATTTTTTC
ACCCCCCCCCCCCGCCCTGGGAAAACACAAAAAAAAAAAAAACAAAGGGG
GGTTCCTTTCCCCCCCCCCCCCGAGGATTTTTGAAATTTTTATTGCGCGC
GGGGAGAAAAAACACCCAAAAAAAACCCCCCCCGCACCCCCCCC
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