EY684492

Overview
NameEY684492
Unique NameEY684492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684492 vs. ExPASy Swiss-Prot
Match: TBC15_MOUSE (TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.393e-12
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 3 
Query:  348 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWVLRKFDAQNWQ 560
            DV RTDRT  FYE Q+N  L  L DIL  Y   D D+GY QGMSDL SP++ ++ENE DAFW    +  Q  Q
Sbjct:  397 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQ 469
[Close]
BLAST of EY684492 vs. ExPASy Swiss-Prot
Match: TBC15_HUMAN (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.393e-12
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 3 
Query:  348 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWVLRKFDAQNWQ 560
            DV RTDRT  FYE Q+N  L  L DIL  Y   D D+GY QGMSDL SP++ ++ENE DAFW    +  Q  Q
Sbjct:  414 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQ 486
[Close]
BLAST of EY684492 vs. ExPASy Swiss-Prot
Match: TBC17_MOUSE (TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.200e-11
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 3 
Query:  348 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWVLRKFDAQNWQGNFRCTESSV 590
            DV RTDRT  FYE  EN  LS L DIL  Y     D+GY QGMSDL SP++ +++NE DAFW    F  +   GNF  ++ ++
Sbjct:  378 DVSRTDRTNKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGF-MELVHGNFEESQETM 459
[Close]
BLAST of EY684492 vs. ExPASy Swiss-Prot
Match: TBC17_HUMAN (TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.873e-11
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 3 
Query:  348 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWVLRKFDAQNWQGNFRCTESSV 590
            DV RTDRT  FYE  EN  L  L DIL  Y     D+GY QGMSDL SP++ +++NE DAFW    F  +  QGNF  ++ ++
Sbjct:  378 DVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGF-MELVQGNFEESQETM 459
The following BLAST results are available for this feature:
BLAST of EY684492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
TBC15_MOUSE3.393e-1253.42TBC1 domain family member 15 OS=Mus musculus GN=Tb... [more]
TBC15_HUMAN3.393e-1253.42TBC1 domain family member 15 OS=Homo sapiens GN=TB... [more]
TBC17_MOUSE2.200e-1148.19TBC1 domain family member 17 OS=Mus musculus GN=Tb... [more]
TBC17_HUMAN2.873e-1148.19TBC1 domain family member 17 OS=Homo sapiens GN=TB... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-F09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684492 ID=EY684492; Name=EY684492; organism=Citrus sinensis; type=EST; length=973bp
CCCGCGTCCGATCAATTAGAGGAGAAGTTTGGGAATTTCTACTTGGTTGT
TGTGAGCCTAAGAGTACATTTGATGAACGAGAGGAGATACGGCAACGTCG
AAGGTTGCAATATTCTGCGTGGAAAGAGGAGTGCCATCAAATCTTTCCTG
TTGTTGGAAGTGGCAAATTCATCACTGCCCCTGTAGTCACTGAAGATGGT
CAACCCATTCAAGACCCTTTAGTACTTCAGGAAACAAATTCAGGTATAAG
TGCTTCTAGTTCAAAAATGGTGAAAGAGCTTCTCAGCCATGGTCCTTTGG
ACAAGAAAGTTATTCAGTGGATGCTAACACTACATCAAATAGGTCTTGAT
GTGATTCGCACTGACAGGACATTGGTGTTTTATGAGAAGCAAGAAAACTT
GTCGAAACTTTGGGATATTCTAGCTGTTTATGCCTGGGTAGATAGAGATG
TTGGCTATTGTCAAGGAATGAGTGATCTTTGTTCCCCCATGATAATTCTG
CTTGAAAATGAAGCTGATGCATTTTGGGTGCTTCGAAAGTTTGATGCGCA
AAATTGGCAAGGAAATTTTCGATGCACTGAGAGCTCTGTTGGGGTGGGAA
GGCCCACCTAATTATTTTGGCTTTCAATTACTCCGGGTTACGATTCCCAA
ACTTTCTTCAGATTTAAGGGATGAATCAAAAAATTTTTACGTTTTTTTGC
TTTGGAATTTTGGGTTAATAAATTATACCGCAAAAAATTGGTTCCAAATA
ATTCTCCGCATCTTAGCCAGGGTAACCCATTTTTTACTTTTTTTCTTTAA
CCACTTCCAAAATTCTTTTGTTTTTTCTTTTTTACCAAAAAACTTAGAAA
TAAAAATTTTTAGAGCGCCCCCTCCCGGTGGGGGTTAGGGGGGGGAAAAA
ACCCCCAAAAAAAAAACCTCCCTATAAAAATGGTTGATTGGGCGAAAAGG
GGATTTTTTTTTTTTTTTTAAGT
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