EY684489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.636e-32 Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGG 232 LRNKF CPIVN+DKLWS+VP+DVKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGG Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGG 140
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.033e-31 Identity = 64/77 (83.12%), Postives = 73/77 (94.81%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGG 232 LRNKF CPIVN+DKLWS+VP+DVKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGG Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGG 140
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20 Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 +N HCP+VNIDKLWS+V + K ++D VP+IDVT+ G+FKVLGKG LP NQPVVVKAK SKTAE++I GG C Sbjct: 67 KNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAERRIVAVGGAC 145
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.639e-19 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 +N +CP VN+D+LW++VP++ K K S + P+ID + GYFKVLGKG+LP+ QP++VKAK S AE KIK AGG C Sbjct: 65 KNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPLIVKAKFFSHEAENKIKAAGGAC 141
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.446e-19 Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+FKVLG G+LP QP++VKA+ SK AEKKIK GG C Sbjct: 64 LRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-TQPIIVKARYFSKVAEKKIKAVGGAC 144
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_EUPCR (60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18 Identity = 44/81 (54.32%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDN--VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 +RN+++CP +N+ KLWS+V ++ + KA D V +IDV + GY+KVLGKG+LPE P+VVKAKL + TAEK+IK+ GG C Sbjct: 64 MRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-VPLVVKAKLFTPTAEKRIKQVGGAC 143
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GG C Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGAC 144
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GG C Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGAC 144
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_HUMAN (60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GG C Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGAC 144
BLAST of EY684489 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGRC 238 RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GG C Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGAC 144 The following BLAST results are available for this feature:
BLAST of EY684489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684489 ID=EY684489; Name=EY684489; organism=Citrus sinensis; type=EST; length=780bpback to top |