EY684484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.865e-37 Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 42 IGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAPQMNVPVPEGCTDPTAENFDHTA*SDDGSCQY 353 IGK V +E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYGK A Q+N+PVPEGCTDP AENFD TA SDDG+C Y Sbjct: 369 IGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.243e-35 Identity = 70/107 (65.42%), Postives = 87/107 (81.31%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAPQMNVPVPEGCTDPTAENFDHTA*SDDGSCQYPL 359 ++GK V K+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI G F+GKAA Q+++PV +GCTDP A+N+D TA SDDGSC Y L Sbjct: 366 NVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 6.170e-35 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAPQM-NVPVPEGCTDPTAENFDHTA*SDDGSCQY 353 +IGK V +E P FEQP MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG+ A Q N+PVPEGCTDP A+NFD TA SDDGSC Y Sbjct: 359 NIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLY 464
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.170e-35 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAPQM--NVPVPEGCTDPTAENFDHTA*SDDGSCQY 353 +IGK V KE P+FEQP MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG A Q NVPVPEGCTDP A N+D TA SDDGSC Y Sbjct: 368 TIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.223e-34 Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAPQMNVPVPEGCTDPTAENFDHTA*SDDGSCQY 353 +IGK V ++ TFEQP MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYGK A Q +PVPEGCTD A+N+D TA SDDGSC Y Sbjct: 358 NIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 462
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.873e-24 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 248 SIGK V KE PTFEQP MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG Sbjct: 368 SIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.022e-21 Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYGK 251 +I K V +E PTF+QP MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYGK Sbjct: 355 NISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.883e-21 Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 39 SIGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 242 +IGK V KE PTFEQP MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN DAI+ G F Sbjct: 368 TIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 6.623e-21 Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 45 GKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 245 GK V KE PTF+QP M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+ Sbjct: 372 GKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of EY684484 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.130e-20 Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 3 Query: 42 IGKSPVRLKEAAPTFEQPTMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 245 IG + + PTFEQP MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+ Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440 The following BLAST results are available for this feature:
BLAST of EY684484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684484 ID=EY684484; Name=EY684484; organism=Citrus sinensis; type=EST; length=954bpback to top |