EY684479

Overview
NameEY684479
Unique NameEY684479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684479 vs. ExPASy Swiss-Prot
Match: BH144_ARATH (Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.358e-13
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 3 
Query:    3 SGSSSKCHN-GKKRQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 191
            SGS+S  +N GK R+K+KKM+ VLR  VPGG ++NT  VLDEAV++LKSLK+E Q LGVG+  N
Sbjct:  186 SGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249
The following BLAST results are available for this feature:
BLAST of EY684479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH144_ARATH1.358e-1360.94Transcription factor bHLH144 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-E07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684479 ID=EY684479; Name=EY684479; organism=Citrus sinensis; type=EST; length=964bp
CCTCTGGCAGTAGCAGCAAATGTCACAATGGGAAAAAACGTCAGAAATTG
AAGAAGATGGTAAATGTCTTGAGGGGTTTTGTGCCTGGCGGCAATGAGTT
GAACACTGTTGGTGTTCTGGATGAAGCTGTGAGGCACCTCAAGTCTCTCA
AGGTTGAAGTGCAGAATCTTGGAGTTGGGAATATGAAGAACTAAGCTTAG
TGCCATGCAATGGTAACATTGATGAGACTCTTTATTATAATTATGAGTTT
ATAAGTTATTAGTTAGTTTCTTGCCTCGCTCTCGGCAGGTCAACATTAGG
TCGATAATAATTTTGAGGGCGTATCTAGAACTTATGGTTGTGGCAGAGAT
ATGCAATTGTGTTTCTGTATTGAATTTGTTTCGATGTTTTTGGTTGCTGA
TCTTTCTTTGAAACTCGATGGGTGGGAACACATGCAATGGCCTTAAGGTA
TGATATGTTATATGCCTACTCTTGATCTAGTTGCCACTAAATTATGCCAT
ATTTGAACCTCTTAAATGTTATAAGTTATGCACTCCTTATATTATGTAAT
GTTATTTTTTTAAGTGATGCCTCCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAATAAAAGGGGGCGGCCCGCTCCTAAAAGATCCAGACTTTAACTACCGC
TGGATGGCAACGACTAAAATCTTTCTAATAAGGGCACCCAAAATTCCAAT
TCCCGGGCCCCCCTTTTTCCAACGCTCTAGCTGGGGAAAAACCTGGGGTT
TACCCACATTTTAATCGCCCTGGAAAAAATCCCCCCCTTTTCGCAACGTG
GGGGGTAAAAGCAAGAAAGGACCGCACCACGTCTACCCCCCTTCCCCAAA
AATTTTGACGCCAACCGAAAGAGGAGAAAATAGAGGCTCCACCCCGTTGT
ATGGGCGCCACTTAAATCGGCGGGGGAGGGGGGGGGGGGGTTGGTTCCAT
CAACCCGATGTAAA
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