EY684478

Overview
NameEY684478
Unique NameEY684478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: BCHH_RHOS4 (Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.942e-28
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 3
Query:   12 GESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAF 431
            G  +AQ L ++G RP  D +GR+   + + L ELGRPRIDV++  SG+FRDL   Q  +L  A    A  + EP  QN++R HAL  A+ +G+D+  A+ RVFSNA G+Y SN+N+ V +S++ +E +L D Y +RKSFA+
Sbjct:  855 GGPIAQALALMGARPRFDHYGRLAGADLIPLSELGRPRIDVIMTLSGIFRDLLPLQTRMLAEAAWKAANAEGEPLAQNFIRAHALSYAQEMGVDMETASLRVFSNAEGAYGSNVNVLVGSSAFGEEDELADAYEARKSFAY 995          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: Y1441_METJA (Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii GN=MJ1441 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.312e-28
Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = 3
Query:   12 GESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATF 512
            GE +  +L+++GV+PV    GRV  +E + LEELGRPRIDV +  SG+ RD+F N + L+D A+  VA LDEP E N+V+KH +E     G+  RE+  R+F +  G+Y + +  AV  S+W +++ L+D ++   S+A+  D  G    +    FE  L T D TF
Sbjct:  863 GEGMGMILYLLGVKPVYRG-GRVVGLEVIPLEELGRPRIDVTIRVSGITRDMFPNCIELVDEAIMKVANLDEPLEMNFVKKHVVENLNK-GLSFRESTFRIFCSPPGTYGNGVKYAVYASAWENDEDLKDAFIYWNSYAYGKDVYG---KKAINAFENILKTVDLTF 1024          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: BCHH_CHLP8 (Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchH PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.783e-27
Identity = 62/166 (37.35%), Postives = 102/166 (61.45%), Query Frame = 3
Query:    6 TYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTAD 503
            T GE++A V+ ++G  P  D FG+++      L++LGRPR+DV++  S +FRD F   M+ LDR VK  A+ DEP E N+++KH +++A A G+D   A +R F+ A G+Y + ++  +E+S+W +E  L D+++ R S A+     G   SE   + +  LG+ D
Sbjct:  931 TKGEAVAVVIRLMGAEPAYDAFGKISHYNLTPLDKLGRPRVDVLMQLSPIFRDAFGILMDQLDRLVKDAAKADEPHEMNFIKKH-VDEALAEGMDFEAATSRQFTQAPGAYGTYVDDMIEDSAWENEGDLDDLFIRRNSSAYGGGRKGEKQSE---ILQKLLGSVD 1092          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: BCHH_RHOCA (Magnesium-chelatase subunit H OS=Rhodobacter capsulatus GN=bchH PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.374e-26
Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 3
Query:   12 GESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCD 440
            G  + Q L ++G RP  D +GR+   E + L ELGRPRIDVV+  SG+FRDL   Q  LL  A  + A  + EP  QN++R + L   +  G+D   A+ RVFSNA G+Y SN+N  V ++ + DE +L D Y +RKSFA+  D
Sbjct:  855 GGPIGQALALMGARPRFDNYGRLAGAELIPLSELGRPRIDVVMTLSGIFRDLLPLQTKLLAEAAYLCASAENEPLAQNFIRANVLATMQDTGMDFETASLRVFSNAEGAYGSNVNTLVGSAGFGDEDELADAYEARKSFAYGRD 998          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: Y908_METJA (Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii GN=MJ0908 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.100e-26
Identity = 59/149 (39.60%), Postives = 93/149 (62.42%), Query Frame = 3
Query:    6 TYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAK---ALGIDVREAAT----RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAF 431
            T G+ + ++L+++GV+PV +  GRV  +E + LEELGRPRIDV +  SG+FRD F N + L+D A+KMVA LDEP+E NYV+KH  E+ +     GID + A      R+FS+  G Y + ++  ++  +W   +    +Y+    +A+
Sbjct:  887 TKGDDIGEILYLLGVKPVWNKMGRVVGLEVIPLEELGRPRIDVTLRISGLFRDTFPNVVELIDEAIKMVANLDEPDEMNYVKKHYREEVEEKIKKGIDEKTAKETSLYRIFSDKPGCYGAGVSHLIDEKNWESIEDFAKVYVEWGGYAY 1035          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: COBN_PSEDE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas denitrificans GN=cobN PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.487e-17
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 3
Query:    6 TYGESLAQVLWMIGVRPVSDTFGR-VNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKAL---GIDVREAAT----RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADA 506
            T G+ +AQ L +IG +P  D   R V   E V L  LGRPR+DV +  SG FRD F +Q+ L D+A++ VA L+E +  N +      +++ L   G++  EAA     RVF    G+Y + +   ++   W  +  L + YL+  ++A+     G     +R +FE  L T +A
Sbjct:  929 TGGDDIAQALALIGAKPTWDMVSRRVMGYEIVPLAVLGRPRVDVTLRISGFFRDAFPDQIALFDKAIRAVA-LEEDDADNMIAARMRAESRRLEAEGVEAAEAARRASYRVFGAKPGAYGAALQALIDEKGWETKADLAEAYLTWGAYAYGAGEEG---KAERDLFEERLRTIEA 1099          
BLAST of EY684478 vs. ExPASy Swiss-Prot
Match: COBN_PSEAE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas aeruginosa GN=cobN PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.487e-17
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 3
Query:    6 TYGESLAQVLWMIGVRPVSDTFG-RVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYV-------RKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEK 467
            T G+ +AQ L ++GVRPV      RV   E + +  L RPR+DV +  SG FRD F N + L D AV+ VAELDE EE N +       R+    Q  A     R+A  R+F    G+Y + +  A+E   W     L ++YL+   +A+     G    E+
Sbjct:  907 TGGDDIAQALALLGVRPVWQAGSQRVADFEILPVSLLDRPRVDVTLRVSGFFRDAFANLIRLFDAAVQAVAELDEAEELNPLAARVRLERQRLEAQGTAPAEARRQAGWRIFGAKPGAYGAGVQGAIEERLWETRADLAEVYLNWGGYAYGAADDGTPARER 1068          
The following BLAST results are available for this feature:
BLAST of EY684478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BCHH_RHOS41.942e-2845.39Magnesium-chelatase subunit H OS=Rhodobacter sphae... [more]
Y1441_METJA3.312e-2840.12Uncharacterized protein MJ1441 OS=Methanocaldococc... [more]
BCHH_CHLP84.783e-2737.35Magnesium-chelatase subunit H OS=Chlorobaculum par... [more]
BCHH_RHOCA2.374e-2644.44Magnesium-chelatase subunit H OS=Rhodobacter capsu... [more]
Y908_METJA3.100e-2639.60Uncharacterized protein MJ0908 OS=Methanocaldococc... [more]
COBN_PSEDE4.487e-1733.14Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
COBN_PSEAE4.487e-1735.19Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684478 ID=EY684478; Name=EY684478; organism=Citrus sinensis; type=EST; length=960bp
ATTAAACTTATGGTGAATCGCTTGCCCAGGTTTTGTGGATGATTGGGGTA
AGGCCTGTATCTGACACATTTGGTAGAGTCAACCGAGTAGAGCCAGTTAG
TCTTGAAGAGCTTGGAAGGCCCAGGATTGATGTTGTTGTTAATTGCTCTG
GGGTTTTCAGAGACCTCTTCATAAATCAGATGAATCTGCTTGACCGGGCA
GTGAAGATGGTTGCTGAACTTGATGAACCAGAAGAACAGAATTATGTTAG
GAAGCATGCACTAGAACAAGCTAAAGCCCTGGGTATCGATGTTCGTGAAG
CAGCAACTCGGGTTTTCTCCAATGCCTCGGGATCCTACTCCTCCAACATA
AACCTTGCTGTTGAGAATTCCTCATGGAATGACGAGAAACAGCTCCAGGA
CATGTATTTGAGCAGGAAGTCCTTTGCCTTTGATTGTGATGCCCCTGGCG
CAGGCATGAGTGAGAAAAGAAAAGTTTTTGAGATGGCTCTAGGCACAGCA
GACGCCACATTCCCAAAACCTCCACTCCTCTGAAATCTCCCTCACTGATG
TGGAGCCACTACTTTCCATTCCGACCCAACAAATTTGGTCCCGAGGTTTC
AGGAAGGGATGGGAAAGAAAACCCAAAGGCCTACTTTGGTGAAAAATACC
CCAGCTAAAGGCCCGGGGGGCGGACCCTTTGCTGAGAAACCGGGAGGGGC
TTGATGCCCCGAACCCAATTTGTTGAAACCCGAAATGGGTTAGAAAGGAT
TAAATGTCCCAGGGGGTTTATTAAGGGGGTTCCCTGGAAATTTAAAAAAG
CCGGGTTTAAATAACCCGGTGTGGGGGGGGAAGGGCAAATTTGGGGGGGC
AATGTTGAGAAAAGGGGGGGCCCAAAAAAAAAAACCTTAAACCCCTCTTT
TTTTTCCGAAGAAGAGGGGGAAAAAGGGTTTAAAGAGGGGGGGGGGGGGA
GAAAACACAC
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