EY684471

Overview
NameEY684471
Unique NameEY684471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.522e-41
Identity = 95/193 (49.22%), Postives = 118/193 (61.14%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDAPFVHLRS*SSKVAFNNSKSPRSTGLGENALPRLMMNTLHEQILAKA 589
            Y+ +  KAA   AG PEW    P DAG YN+ PE T FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y   +HA ELTAGYYN   RDGY PIA+ML+RH AI NFTC+EMRD EQP DA           ++    +  R    GENALPR    T + QI+  A
Sbjct:  213 YLKADFKAAVARAGHPEWEL--PDDAGKYNDVPESTGFF-KSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVA--GENALPRYDA-TAYNQIILNA 399          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.360e-39
Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y +++HA ELTAGYYN   RDGY PIA+M++RH  I NFTC+EMRD EQ  DA
Sbjct:  213 YLKADFKAAAAKAGHSEWEL--PDDAGTYNDIPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDA 356          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.360e-39
Identity = 81/147 (55.10%), Postives = 102/147 (69.39%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+  S KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y + +HA ELTAGYYN   RDGY PIA++++RH AI NFTC+EMRD EQ  DA
Sbjct:  213 YLRESFKAAAAKAGHSEWEL--PDDAGTYNDVPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDA 356          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.171e-38
Identity = 79/147 (53.74%), Postives = 100/147 (68.03%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAA  AG PEW    P DAG YN+ PE TQFF K+NG + +  G+FFLSWYS  L+ HG++IL  A  +F    V++++K++GIHW Y   +HA ELTAGYYN   RDGY  IA+ML RH A  NFTC EMRD EQ ++A
Sbjct:  210 YLEADFKAAAAKAGHPEWEL--PDDAGEYNDTPEKTQFF-KDNGTYLTEKGKFFLSWYSNKLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEA 353          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.610e-38
Identity = 79/147 (53.74%), Postives = 100/147 (68.03%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG+ IL  A   F    V +++KV+GIHW Y +++HA ELTAGYYN   RDGY PIA+M++RH A  NFTC+EMRD EQ  DA
Sbjct:  213 YLKAEFKAAAARAGHSEWEL--PDDAGTYNDVPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDEILDEANKAFLGCKVNLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDA 356          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.451e-38
Identity = 79/147 (53.74%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAA + G PEW    P DAG YN+ PE TQFFR +NG + +  G FFL+WYS  L+ HG+RIL  A  +F    V++++K++GIHW Y   SHA ELTAGYYN   RDGY  IA+ML RH A  NFTC EMRD EQ   A
Sbjct:  210 YLQADFKAAAAAVGHPEWEF--PNDAGQYNDTPERTQFFR-DNGTYLTEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQA 353          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.916e-38
Identity = 79/147 (53.74%), Postives = 96/147 (65.31%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAA + G PEW    P D G YN+ PE TQFFR +NG + S  G FFL+WYS  L+ HG+RIL  A  +F    V++++K++GIHW Y   SHA ELTAGYYN   RDGY  IA+ML RH A  NFTC EMRD EQ   A
Sbjct:  210 YLQADFKAAAAAVGHPEWEF--PNDVGQYNDTPERTQFFR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQA 353          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 157.147 bits (396), Expect = 1.295e-37
Identity = 86/190 (45.26%), Postives = 114/190 (60.00%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDAPFVHLRS*SSKVAFNNSKSPRSTGLGENALPRLMMNTLHEQIL 580
            YM++  K A + AG  +W   G   AG YN+ P+ T+FFR  NG + +  G+FFL+WYS  L+ HG+++L  A  +F    V I+ KV+GIHW Y   SHA ELTAG+YN   RDGY PIA+MLARH A  NFTC+EMRD EQP +A     +    +V  +  K       GENALPR      ++ +L
Sbjct:  214 YMVADWKEAVKQAGNADWEMPGK-GAGTYNDTPDKTEFFRP-NGTYKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAP-QELVQQVLSSGWKEYIDVA-GENALPRYDATAYNQMLL 399          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.768e-37
Identity = 78/147 (53.06%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+ +  KAAAE AG PEW      DAG YN+ PE TQFF  +NG + +  G+FFL+WYS  L+ HG++IL  A  +F    V++++KV+GIHW Y   +HA ELTAGYYN   RDGY  IA ML RH A  NFTC EMRD EQ  +A
Sbjct:  210 YLQADFKAAAEEAGHPEWDLLD--DAGTYNDTPEKTQFFA-DNGTYQTDKGKFFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEA 353          
BLAST of EY684471 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.395e-37
Identity = 75/147 (51.02%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   11 YMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDPEQPQDA 451
            Y+    K AA  AG PEW    P DAG YN+ PE+T FF+K+ G + S  G+FF++WYS  L+ HG++IL  A  IF    V ++ KV+GIHW Y   SHA ELTAGYYN   RDGY PIA+ML++H  I NFTC+EM+D +   +A
Sbjct:  215 YLKKDFKEAAAKAGHPEWDL--PEDAGEYNDKPEETGFFKKD-GTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEA 358          
The following BLAST results are available for this feature:
BLAST of EY684471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AMYB_SOYBN2.522e-4149.22Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
AMYB_TRIRP2.360e-3954.42Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_MEDSA2.360e-3955.10Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_WHEAT1.171e-3853.74Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=... [more]
AMYB_VIGUN2.610e-3853.74Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_HORSP4.451e-3853.74Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV... [more]
AMYB_HORVU9.916e-3853.74Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1[more]
AMYB_IPOBA1.295e-3745.26Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4[more]
AMYB_MAIZE3.768e-3753.06Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1[more]
AMYB_ARATH8.395e-3751.02Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-D11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684471 ID=EY684471; Name=EY684471; organism=Citrus sinensis; type=EST; length=938bp
CTTGATGTAGTATATGCTCAGTAGCTTAAAAGCAGCAGCTGAATCTGCTG
GTAAGCCAGAATGGGGCAGCACAGGCCCTACTGATGCTGGACATTACAAC
AACTGGCCAGAAGATACACAGTTTTTCCGAAAAGAAAATGGTGGTTGGTG
TAGCCCTTATGGTGAATTTTTCCTAAGCTGGTATTCGCAGATGCTCTTAG
ATCACGGAGAGAGAATTCTCTCATCTGCCAAGGCAATTTTCGATGCTACA
GGTGTTAAGATCTCGGTTAAGGTTGCAGGAATCCACTGGCACTATGGGTC
TAGGTCCCATGCCCCTGAGCTCACAGCTGGATATTACAATACACGATTCC
GTGATGGTTACCTCCCTATTGCCCAGATGCTAGCACGACATGGTGCCATA
TTCAACTTTACTTGCATAGAGATGCGTGATCCTGAACAACCACAAGATGC
CCCTTTTGTGCACCTGAGAAGCTAGTCAAGCAAAGTGGCTTTCAACAACT
CAAAAAGCCCACGTTCCACTGGGCTGGGGGAAAATGCGTTGCCCCGTTTA
ATGATGAATACGCTTCACGAGCAAATTCTTGCGAAGGCACATTCCCTTTG
ATTGTAAAACAAAACCAAATGTGTGCCTTTACCTACTTTGGGGGAATGAA
ATCCCCCTTTTTTTCCAACCCGAAAATTTGGAAGAAATTTTGGGGGATTT
GTTGAAAAAAAATAAAAGAAGGGAAAGGAGGTTTCCCCGGGGTTTTTGGA
CCAAGGTGGAAGCGCGAACTTTAAAACCACTTCCTTCCTTTGTGCCCCCC
ACCTTTTGGTTGTTAAAAAGGGTGCCCGGGGCCCCTTTAAAACACCAAAA
CGGGATCTTTTTTATTTTTTTTTCTTACAAACAGGCCCCGTTGGTACCAG
GTTTTTTTTTTCACAATAAAAAAAAAAAAAGGCACAAG
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