EY684464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.984e-63 Identity = 110/137 (80.29%), Postives = 118/137 (86.13%), Query Frame = 1 Query: 61 MGVSSDPNLDGSDEQQKRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLFEWEQEQRILRP 471 MG SSDP DGSDEQQKRSEIYTYE+PWHIYAMNWSVRRDK YRLAI SLLEQYPNRVEIVQLD+S GEIR+DPNLSFEHPYPPTKTIFIPDKECQ+PDLLATSSDFLR+WRI+D+ RVELKS + P Sbjct: 1 MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGP 137 HSP 2 Score: 32.7278 bits (73), Expect = 1.984e-63 Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 450 RTANTAAPLTSFDWNEAEPK 509 + + PLTSFDWNEAEP+ Sbjct: 130 KNSEFCGPLTSFDWNEAEPR 149
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.168e-58 Identity = 101/137 (73.72%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 61 MGVSSDPNLDGSDEQQKRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLFEWEQEQRILRP 471 M SSD +GS+EQ KRSEIYTYE+PW IYAMNWS+RRDK YRLAI SL+EQYPNRVEIVQLD+S GEIR+DPNL FEHPYPPTKT FIPDKECQ+PDLLATSSDFLR+WRISD++ RVELKS ++ P Sbjct: 1 MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGP 137 HSP 2 Score: 32.3426 bits (72), Expect = 5.168e-58 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 450 RTANTAAPLTSFDWNEAEPK 509 + + + P+TSFDWNEAEP+ Sbjct: 130 KNSEFSGPITSFDWNEAEPR 149
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.196e-30 Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 109 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVE 423 KR EIY YE+PW +YAMNWSVR DK +RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLE 108 HSP 2 Score: 31.187 bits (69), Expect = 1.196e-30 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 450 RTANTAAPLTSFDWNEAEP 506 + ++ APLTSFDWNE +P Sbjct: 115 KNSDFCAPLTSFDWNEVDP 133
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.196e-30 Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 109 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVE 423 KR EIY YE+PW +YAMNWSVR DK +RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLE 108 HSP 2 Score: 31.187 bits (69), Expect = 1.196e-30 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 450 RTANTAAPLTSFDWNEAEP 506 + ++ APLTSFDWNE +P Sbjct: 115 KNSDFCAPLTSFDWNEVDP 133
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.894e-30 Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 109 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSL 435 ++ IYTY SPW IY ++WS R ++ +RLAI S LE Y NRV+++QL++ T + FEHPYPPTK ++IPDK +PDLLAT+ D+LR+W + R ++LKSL Sbjct: 2 EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVV--CGFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSL 108 HSP 2 Score: 28.8758 bits (63), Expect = 9.894e-30 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 468 APLTSFDWNEAEP 506 APL+SFDWNE +P Sbjct: 118 APLSSFDWNETDP 130
BLAST of EY684464 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.040e-24 Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 97 DEQQKRSEIYTYESPWHIYAMNWS-VRRDKNYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPD--KECQKPDLLATSSDFLRVWRISDEDRRVE 423 D + TY+SP+ +YAM +S +R +R+A+ S LE Y NR++I+ D + ++ PNLSFEHPYPPTK +F P + DLLA+S DFLR+W I+++ VE Sbjct: 7 DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVE 118 HSP 2 Score: 35.039 bits (79), Expect = 4.040e-24 Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 Query: 447 TRTANTAAPLTSFDWNEAEPK 509 ++T+ APLTSFDWN+ EPK Sbjct: 126 SKTSEFCAPLTSFDWNDVEPK 146 The following BLAST results are available for this feature:
BLAST of EY684464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684464 ID=EY684464; Name=EY684464; organism=Citrus sinensis; type=EST; length=1015bpback to top |