EY684445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.830e-30 Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 MSCNGCRVLRKGCSE+CILRPC+QWIESPE+QGHATVFVAKFFGRAGLMSFISAVPESQ P ++ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALF 64 HSP 2 Score: 23.8682 bits (50), Expect = 2.830e-30 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 502 GRTVNPGNGSWKVFW 546 GRTVNP NG+ + W Sbjct: 73 GRTVNPVNGAVGLLW 87 HSP 3 Score: 23.483 bits (49), Expect = 2.830e-30 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 468 ALFQALLDEACG 503 ALFQ+LL EACG Sbjct: 62 ALFQSLLYEACG 73
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.681e-30 Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 MSCNGCRVLRKGCSE+CILRPCLQWIES ESQGHATVFVAKFFGRAGLMSFIS+VPE QRP ++ Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALF 64 HSP 2 Score: 25.0238 bits (53), Expect = 3.681e-30 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 502 GRTVNPGNGSWKVFWGR 552 GRTVNP NG+ + W R Sbjct: 73 GRTVNPVNGAVGMLWTR 89 HSP 3 Score: 23.483 bits (49), Expect = 3.681e-30 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 468 ALFQALLDEACG 503 ALFQ+LL EACG Sbjct: 62 ALFQSLLFEACG 73
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.970e-29 Identity = 54/64 (84.38%), Postives = 62/64 (96.88%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 MSCNGCRVLRKGCSE+CILRPC+QWIE+ ++QGHATVFVAKFFGRAGLMSFISAVP+SQRP ++ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALF 64 HSP 2 Score: 23.8682 bits (50), Expect = 2.970e-29 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 502 GRTVNPGNGSWKVFW 546 GRTVNP NG+ + W Sbjct: 73 GRTVNPVNGAIGMLW 87 HSP 3 Score: 23.483 bits (49), Expect = 2.970e-29 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 468 ALFQALLDEACG 503 ALFQ+LL EACG Sbjct: 62 ALFQSLLYEACG 73
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.114e-21 Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 MSCNGCRVLRKGCSE C +RPCL WI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P RPG++ Sbjct: 3 MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIF 66
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.657e-21 Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 MSCNGCRVLRKGCSE+C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ ++ P+ RP ++ Sbjct: 3 MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIF 66 HSP 2 Score: 21.1718 bits (43), Expect = 7.657e-21 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 468 ALFQALLDEACG 503 A+F++LL EACG Sbjct: 64 AIFRSLLYEACG 75
BLAST of EY684445 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.951e-19 Identity = 38/64 (59.38%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 170 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQRPGMY 361 +SCNGCRVLRKGC++ C +RPCLQWI+S +SQ +AT+F+AKF+GRAGL++ I + P+ RP ++ Sbjct: 3 ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIF 66 HSP 2 Score: 21.9422 bits (45), Expect = 3.951e-19 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 1 Query: 475 FRLCWTKPVGRTVNPGNGSWKVFW 546 FR + GR VNP +GS + W Sbjct: 66 FRSLLYEACGRIVNPVDGSVGLMW 89 The following BLAST results are available for this feature:
BLAST of EY684445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684445 ID=EY684445; Name=EY684445; organism=Citrus sinensis; type=EST; length=1012bpback to top |