EY684444

Overview
NameEY684444
Unique NameEY684444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB2_ARATH (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.589e-22
Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3
Query:  405 MASVQDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECRNRYG 641
            MA V+DQLEI F L DGSDIG K FP A +VAT KE+V+++WP+DK NGP+TVKDV+LI+AG+   NNKT+G+CR+  G
Sbjct:    1 MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRILENNKTVGDCRSPVG 79          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB1_ORYSJ (Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica GN=MUB1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.699e-19
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 3
Query:  414 VQDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECRN 632
            VQ+Q EI F L DG+DIG K +PAA +VAT KES++++WPKDK  GPRTV D++LI AGK   NNKTL EC++
Sbjct:    5 VQEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINAGKILENNKTLSECKS 77          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB1_ARATH (Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana GN=MUB1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18
Identity = 44/76 (57.89%), Postives = 60/76 (78.95%), Query Frame = 3
Query:  405 MASVQDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECRN 632
            MA V +QLEI F LTDGSDIG K+FP A +V+  KE+V+S WP++K NGP+TVK+V+LI+AGK   N+KT+ + R+
Sbjct:    1 MAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRS 76          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB6_ARATH (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana GN=MUB6 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.297e-13
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 3
Query:  405 MASVQDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECR 629
            MA  +D +E+ F L DG+DIG   +  + +V++ KE ++S+WPKDK N P+TV D++LI AGK   NN+TL E R
Sbjct:    1 MAGEEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESR 75          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB5_ARATH (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana GN=MUB5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.196e-12
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  417 QDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECRN 632
            +D +E+ F L DG+DIG   +    +VA+ KE ++++WPKDK N P+ + +V+LI  GK   NNKTL E R+
Sbjct:    4 EDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNKTLSEARS 75          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB3_ORYSJ (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica GN=MUB3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.341e-12
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  405 MASVQDQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECR 629
            MA  ++ +E+ F L DG+DIG   +  + +V+  KE +L+RWP+DK   P+TV D++LI AG+   NN+TL E R
Sbjct:    1 MAGGKEPIEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILENNRTLAESR 75          

HSP 2 Score: 22.3274 bits (46), Expect = 6.341e-12
Identity = 10/18 (55.56%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  646 PGGSTTKLVVVHPPSKKK 699
            PGG  T  VVV PP   K
Sbjct:   82 PGGVITMHVVVRPPQPDK 99          
BLAST of EY684444 vs. ExPASy Swiss-Prot
Match: MUB2_ORYSJ (Membrane-anchored ubiquitin-fold protein 2 OS=Oryza sativa subsp. japonica GN=MUB2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.615e-11
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  420 DQLEIMF*LTDGSDIGHKSFPAAKSVAT*KESVLSRWPKDKHNGPRTVKDVQLITAGKKWRNNKTLGECRN 632
            + +E+ F L DGSDIG      A +V   KE VL+RWP+ K   PRTV DV +I AG+   NN+TL E RN
Sbjct:   12 EAVEVRFRLDDGSDIGPSMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVTIINAGQVLENNRTLAESRN 82          
The following BLAST results are available for this feature:
BLAST of EY684444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MUB2_ARATH7.589e-2263.29Membrane-anchored ubiquitin-fold protein 2 OS=Arab... [more]
MUB1_ORYSJ2.699e-1961.64Membrane-anchored ubiquitin-fold protein 1 OS=Oryz... [more]
MUB1_ARATH6.648e-1857.89Membrane-anchored ubiquitin-fold protein 1 OS=Arab... [more]
MUB6_ARATH1.297e-1348.00Membrane-anchored ubiquitin-fold protein 6 OS=Arab... [more]
MUB5_ARATH3.196e-1244.44Membrane-anchored ubiquitin-fold protein 5 OS=Arab... [more]
MUB3_ORYSJ6.341e-1244.00Membrane-anchored ubiquitin-fold protein 3 OS=Oryz... [more]
MUB2_ORYSJ4.615e-1149.30Membrane-anchored ubiquitin-fold protein 2 OS=Oryz... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-B05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684444 ID=EY684444; Name=EY684444; organism=Citrus sinensis; type=EST; length=936bp
GAGATTGGAAGGAGAACGCAAGATATGGAAGCATTGAACTTAGATATATA
ATTACATGACTTTGAAAACTCTGAAACTGCCTCCTCACTAAACACTTATT
TTATTTCGTCTCTTTATTATTAACTATTGAAAAAAGCCACAACCTTGTAT
CTTCTTCTTAAGGTTTTGGAATTTTTGAAACAATAACTGGGGAAAAAGGG
AGTGACCGGATCAGTTTTTGAGCGCACCAAAGTGAGAATATTGATCAATC
TGCGAATTTCTGCGTATTCTGGTGGGTTTTTGATTGCTCAGAAATAAACC
TATTGAGGATTGACATATACTTTGGGAGAAGGCTTCAGTGAAGATCTCTG
AGATTGAAATTTTAAAGACTTTGAGGTCCTTGGAGTCAATCGGAAAGCTT
TAAAATGGCAAGTGTGCAAGATCAGTTAGAGATCATGTTCTGATTGACCG
ATGGATCGGATATTGGTCACAAGAGCTTTCCTGCTGCTAAAAGTGTTGCA
ACCTAGAAAGAAAGCGTTCTTTCTCGATGGCCTAAAGATAAACATAATGG
TCCGAGGACAGTGAAAGATGTACAGTTAATAACCGCCGGAAAAAAATGGA
GAAACAATAAAACATTGGGAGAATGCCGGAATCGCTATGGTATATCCCGG
GGGAAGTACAACCAAGCTTGTTGTTGTTCATCCTCCTTCTAAGAAAAAGG
GAAAAAATTTTTATTTTTGAAAAATAAGGGCAACAAAAGGTGTCCGAAAA
CCCAGGGAAAAATTTTGGCTCCCCCACCCTCCCAGGGTGTTTTGGGTAAG
GGAAACGGGAACCCTCTTCCAAATTGAAAAAAAAAATAAAATACAAAAAT
TAAAGGGGGAGTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTT
TGGGGGAAAAAAAAAAAAATTATAGGAAAAAAAAGG
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