EY684437

Overview
NameEY684437
Unique NameEY684437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684437 vs. ExPASy Swiss-Prot
Match: HY5_ARATH (Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.985e-28
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:  109 RRLLRNRVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNTTASRRGGSGGDTNADGS 336
            +RLLRNRVSAQQARERKKAYL+ELE RVKDLE KNSEL+ERLSTLQNENQMLRHILKNTT ++RGG GG +NAD S
Sbjct:   93 KRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGG-SNADAS 167
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BLAST of EY684437 vs. ExPASy Swiss-Prot
Match: HY5_SOLLC (Transcription factor HY5 OS=Solanum lycopersicum GN=HY5 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22
Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 1 
Query:  109 RRLLRNRVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNTTASRRGG 306
            +RLLRNRVSAQQARERKKAYL +LE RVK+LE KN+EL+ERLSTLQNENQMLRHILKNTTA  + G
Sbjct:   91 KRLLRNRVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTLQNENQMLRHILKNTTAGAQEG 156
[Close]
BLAST of EY684437 vs. ExPASy Swiss-Prot
Match: HYH_ARATH (Transcription factor HY5-like OS=Arabidopsis thaliana GN=HYH PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.919e-14
Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 1 
Query:  109 RRLLRNRVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNT 285
            +RLLRNRVSAQQARERKK Y+++LE+R  +L+  N +L+E++STL NEN MLR +L NT
Sbjct:   83 KRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 141
The following BLAST results are available for this feature:
BLAST of EY684437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HY5_ARATH5.985e-2884.21Transcription factor HY5 OS=Arabidopsis thaliana G... [more]
HY5_SOLLC2.203e-2281.82Transcription factor HY5 OS=Solanum lycopersicum G... [more]
HYH_ARATH4.919e-1462.71Transcription factor HY5-like OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684437 ID=EY684437; Name=EY684437; organism=Citrus sinensis; type=EST; length=993bp
TGAAGAGGTAAAAATTAAATTCCTATAAAAAGTTGATGTCAACTTCACCG
TTTTGCCCTTCCAAGATTTTACCAATGCTGTGGCATTTCGATTTGGATTT
GTGCACGACGCAGGTTGTTGAGGAACAGAGTGTCAGCTCAGCAAGCAAGA
GAGAGGAAAAAGGCGTACTTGAATGAGTTGGAGACGAGAGTTAAAGACTT
GGAGAGGAAGAATTCCGAGCTCGATGAGAGGCTCTCCACGTTGCAAAATG
AGAATCAGATGCTGAGACACATACTGAAGAACACCACGGCGAGCCGAAGA
GGAGGAAGCGGCGGTGATACAAATGCCGATGGGTCCTTTTAATAGAATAA
GAAAAGAAGGAATATTCTTACTGAGAGAGTTACTTTTTATGAAAAATAGA
ACCGGCAATTTGCTGGTTGAAAGTTACCTCTAACGTGAAAATAGACCTGT
AAGCCTTGGCAAGCTTAGCCTATAAATTATCGCGTTGTAATGTTTCTATG
GCGCCTGCCTTGCCTGTTTGTTCCATAATTGGAGCAAATGGTCAATCATT
AATGTTAGCAAGAATTAACCCCTGACGAAAGTTAAAGAAAAAAGAGAAAA
CAAAAACAGGAAAAACAAGAAAAACAAAGATCAAAAAGATCTATAAGTAT
AACGGTACTATCCATGTACGCGTCGGCCATACCGGCATACCTTGCCTAGA
TCCTAAATGGGGGGGGGGCGCCCCCTTAAAAGGAAAGGACTTTATAGCGG
GGGGGGTTAGGGGAAAACTATCTTTTTTCTATATGGAGGCCCAATATATT
TTATTTTGCGGGCGCCGTTTTTTAAAAGGGCGGAGGGGGGGAGGAAAACC
CGGGCGGTTCGACCACTATAATTTTGCTGCTCGTGGGGACCACCCCCCCC
CTTTCTTCATACCCAGGTTGGGGGGAAAAAATAAAAAAAAAAAAAAAAGC
CCCACCGCCCACCTGTCGTGCTCCCCCTCTTCTTCCTCCTCAA
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