EY684424

Overview
NameEY684424
Unique NameEY684424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684424 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 1 
Query:  430 MKGLFKSKPRTPVDIVRQTRDLIIYAHRS---AEVRESKREDKMAEVCKNIRELKSI 591
            M+GLFKSKPRTP DIVRQTRDL++YA RS    ++RESKRE+KM E+ K+IR+LK I
Sbjct:    1 MRGLFKSKPRTPADIVRQTRDLLLYADRSNSFPDLRESKREEKMVELSKSIRDLKLI 57
[Close]
BLAST of EY684424 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 36/57 (63.16%), Postives = 50/57 (87.72%), Query Frame = 1 
Query:  430 MKGLFKSKPRTPVDIVRQTRDLIIYAHRSA---EVRESKREDKMAEVCKNIRELKSI 591
            MKGLFKSKPRTP D+VRQTRDL++++ RS    ++R+SKR++KMAE+ +NIR++KSI
Sbjct:    1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSI 57
The following BLAST results are available for this feature:
BLAST of EY684424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MO25M_ARATH9.154e-1468.42Putative MO25-like protein At4g17270 OS=Arabidopsi... [more]
MO25N_ARATH1.196e-1363.16Putative MO25-like protein At5g47540 OS=Arabidopsi... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684424 ID=EY684424; Name=EY684424; organism=Citrus sinensis; type=EST; length=883bp
AGAAGATATTTTTTCATCTCATCATCATCATCGGGATGACATCGAGTGCA
CATGGTAACTACCGAGTGGCGAACACTTAAACGTAAAACCCCAAAGCGAA
GCCGTTGATTGATAATTGATTGACTAAAATCGAAAACGACGCAGCACAGT
TTTTCAATAGATAAAAATGAAATAAAAATCTTTAAAAAAATCATTGAAAC
GCATGAACAGTCTCTTTCTCTCTGTAGACTGTAACAACAACTCAGACAGC
AAAATTAAATTCGAAAGCTGAAACCCTAAAGCCTAATTAGAAGAAGAAGA
TACACAATAGGAATCTGTGCGTCAAAGCCGAAAGCTGAGGCGCTCTCAGC
CTCGGCGAGTCAATCGGTCCAGCGCCTCTCGAGCTCAGCCAGTTCAAGTT
CGATTAACGAATTAGACCCTAACACAAAAATGAAGGGACTTTTCAAATCC
AAGCCTCGTACTCCCGTCGACATCGTCCGCCAAACTCGGGATCTTATTAT
TTACGCCCATCGCAGCGCAGAAGTTCGTGAATCCAAACGCGAAGACAAGA
TGGCAGAAGTATGTAAAAACATCAGGGAATTAAAGTCCATAACTTAATGG
CAATAGTGGATCTGAACCAGGTTTCAAAAGGATGGGGCACAATTGGACTG
CAAATTTCTTCAGGGAAAAACCGTTAAGGGCTTTTGGAAAACTTGTCCTT
CCAAAATTTGAACTTTGGAGGGCAGGGAAAAAATGCCCCCTCGGGGTGGT
TGGTTATTTATAAAAAGGGGAACAATTTTACACCCAAAGTTTGAATTGGC
CTCTCGTAGAAACTTTTAAAAAACAAAAATTAAAAATTTTTTTGGGAAAT
TTTCTAGGAATACCTGGGGATTTTGAAAAAAAC
back to top