EY684420

Overview
NameEY684420
Unique NameEY684420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684420 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.945e-39
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 2 
Query:  125 IRAVASED-FATVKTAEDKVKLGGSDLKVTKLDVGAWSWGDTIYWNNFQWDDRKMKAAKAAFDTSLDNGITFFYTAEINGSKDSFGAINSETLLGRFIXXXXXXXXXXXXXXQPSLAALPWKAG 493
            +RAVAS D  A   + E KVKLGGSDLKVTKL +G WSWGD  YWN+FQWDDRK+KAAK AFDTSLDNGI FF TAE+ GSK S GAI+SETLLGRFI                  AALPW+ G
Sbjct:   30 VRAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALPWRFG 153

HSP 2 Score: 30.4166 bits (67), Expect = 1.945e-39
Identity = 30/103 (29.13%), Postives = 45/103 (43.69%), Query Frame = 3 
Query:  486 RLGHQNVLPALKDSLFRLGLSYC*V*TTALGLELGEMKVTLMVHGIQGNQGFRRGVG-----------GFKITRKKNTKRLSKNLKKKRYYYISNPFN*CTIF 761
            R G ++V+ ALKDSL RL LS          ++L +    L   G+ GN+G+  G+G           G     +K  +   + LKK+     SN  N   I+
Sbjct:  151 RFGRESVVTALKDSLSRLELS---------SVDLYQ----LHWPGLWGNEGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIY 240
The following BLAST results are available for this feature:
BLAST of EY684420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1669_ARATH1.945e-3963.71Uncharacterized oxidoreductase At1g06690, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-H05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684420 ID=EY684420; Name=EY684420; organism=Citrus sinensis; type=EST; length=834bp
ACATAGATTTTATCTTGGAAATTTTCTGAAGATATAGGAACCCTTTAGTG
GGTTACAGTCTAAAATGGCCATGCATGTGAGCGGTGCATGCTTTTCTGTG
TTCAATGGGAGCAGAGTTGGCAACATAAGAGCCGTTGCTTCTGAGGATTT
TGCTACAGTGAAAACAGCCGAAGACAAAGTGAAATTAGGGGGGTCTGATT
TGAAGGTGACAAAGCTTGACGTTGGGGCTTGGTCATGGGGTGACACTATC
TACTGGAATAACTTCCAATGGGATGACAGGAAGATGAAGGCTGCTAAGGC
TGCTTTTGATACCAGTCTGGATAATGGAATAACTTTTTTCTATACTGCTG
AAATAAATGGTTCAAAGGACTCATTCGGTGCCATAAATTCCGAAACACTA
CTGGGAAGATTTATAAGGAAAAGAAACAAAAGGAATCTGAAGTGGAGGTT
ACTGTTGCAACCAAGTTTGGCAGCTTTGCCATGGAAGGCTGGGCCATCAG
AATGTCCTCCCAGCACTTAAGGATTCCCTTTTCCGGCTTGGACTTTCTTA
CTGTTGAGTTTAAACAACGGCACTGGGGCTGGAATTGGGGGAAATGAAGG
TTACATTGATGGTCCATGGAATACAGGGGAACCAGGGCTTTAGGAGAGGT
GTTGGGGGTTTTAAAATAACACGGAAAAAAAACACCAAAAGGCTTTCTAA
AAACTTAAAAAAAAAGAGATATTATTATATTTCAAACCCATTTAATTAAT
GCACCATATTCATAGAGACTAAAAAAAAAAGGTGGAAAGGGCTGCAGGGT
GGAGAAATGGGGAAAAATTTTAATACCAAAGTGT
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