EY684415

Overview
NameEY684415
Unique NameEY684415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684415 vs. ExPASy Swiss-Prot
Match: FPP3_ARATH (Filament-like plant protein 3 OS=Arabidopsis thaliana GN=FPP3 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.815e-28
Identity = 73/124 (58.87%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  138 MDRRSWLWRRKXXXXXXXXXXXXXXXXXXXXXRFSDDQTHSSQSSEATSKAPPLDEVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNSALENR 509
            MDRRSWLWRRK                     RFSDDQ   SQS E  SK    +E     +K LTE+LSAALLNVS KEDL KQHAKVAEEAVSGWEKAENE + LKQQL A++ K SALE+R
Sbjct:    1 MDRRSWLWRRKSSEKSPGETESTGSVSSHSE-RFSDDQR--SQSPELNSKPVTREEEATADIKILTERLSAALLNVSLKEDLAKQHAKVAEEAVSGWEKAENEAAALKQQLDASTSKVSALEDR 121          
BLAST of EY684415 vs. ExPASy Swiss-Prot
Match: FPP1_ARATH (Filament-like plant protein 1 OS=Arabidopsis thaliana GN=FPP1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.363e-20
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 3
Query:  246 DQTHSSQSSEATSKAPPLD-----EVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNSALENRV 512
            + T  S+  E  S    L+     E + DS+KTL EKLSAAL NVSAK+DLVKQH KVAEEAV+GWEKAENE+  LK++L+AA  KN  LE+RV
Sbjct:   32 ESTMESRDDEIQSPTVSLEVETEKEELKDSMKTLAEKLSAALANVSAKDDLVKQHVKVAEEAVAGWEKAENEVVELKEKLEAADDKNRVLEDRV 125          
BLAST of EY684415 vs. ExPASy Swiss-Prot
Match: FPP_SOLLC (Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 3
Query:  372 KEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNSALENRV 512
            KEDLVKQHAKVAEEA++GWEKAENE++ LKQQL AA Q+N  LE RV
Sbjct:    1 KEDLVKQHAKVAEEAIAGWEKAENEVAVLKQQLDAAVQQNLTLEVRV 47          
BLAST of EY684415 vs. ExPASy Swiss-Prot
Match: FPP2_ARATH (Filament-like plant protein 2 OS=Arabidopsis thaliana GN=FPP2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 32/50 (64.00%), Postives = 43/50 (86.00%), Query Frame = 3
Query:  363 VSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNSALENRV 512
            + +K++LVKQHAKVAE+AV+GWEKAENE+  LKQ+L+ A+ KN  LE+RV
Sbjct:   13 MDSKDELVKQHAKVAEDAVAGWEKAENEVVELKQKLEDAADKNIVLEDRV 62          
The following BLAST results are available for this feature:
BLAST of EY684415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
FPP3_ARATH8.815e-2858.87Filament-like plant protein 3 OS=Arabidopsis thali... [more]
FPP1_ARATH1.363e-2058.51Filament-like plant protein 1 OS=Arabidopsis thali... [more]
FPP_SOLLC1.784e-1276.60Filament-like plant protein (Fragment) OS=Solanum ... [more]
FPP2_ARATH5.741e-1164.00Filament-like plant protein 2 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-G10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684415 ID=EY684415; Name=EY684415; organism=Citrus sinensis; type=EST; length=902bp
CCCACGCGTCCGCCCACGCGTCCGACTTGGGATTCAATCGAAAGCAGAGA
TTGATTGAATTGAGTGAGTGTGTGTGTAGGATCATCAATATTCGTCTAGA
TTTAGATTAAATTATAATTTAGAAAATTAGAAATTAGATGGACCGTCGTA
GTTGGCTTTGGCGAAGAAAGTCCGGTGGCGGTGCCGCTGGCGGTGAAACT
GAGAGTTCCGGCTCCGTTTCTTCCCTTTCTGAACGGTTCTCCGATGATCA
GACTCATAGTTCGCAGTCATCAGAGGCCACGTCTAAAGCGCCACCTCTCG
ATGAAGTAGTCAATGACAGTGTGAAGACTCTAACAGAGAAACTGTCCGCT
GCTCTTCTCAACGTCAGTGCCAAGGAAGACTTGGTAAAGCAGCATGCTAA
AGTTGCAGAAGAAGCTGTATCAGGCTGGGAGAAGGCTGAAAATGAATTGT
CAACATTAAAGCAACAACTTAAGGCTGCTTCTCAGAAGAATTCAGCACTT
GAAAATCGAGTTTAGTCTTCTTGATGGGGGACTCAAGGGAAGTGGAAGGC
AACTAAGGCAAGCTAGGGAAGAGCAGGAACAGAGGATCCCGGAAAACTGT
TTCTTAAGCAAATTTTAAAAGGGGAATTCGAAAAAAGTCTGAACTTGGAG
AAGAAAGCTGGTTGGATCCCCAAAAAAAACTGGCAAACTGGCCAAAAGGG
GAAACCCCCGGCCCCCCGCGGAACGGGGATTCTCGGGCTCCAAAAAATGG
GGGGGGGGCAAAAAAAAAAAAATTCGGGCCCCTTTAACTCTGGAATCTTC
TTTTCTCTTAGTTAAGGGGGCCTGAAAACAAAAGAGATTATGTGAAAAGG
GGGCTATTAACCCCCAAAAGGGGGGGGGGAAAAAACCCCCGGAAGGACAA
AA
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