EY684391

Overview
NameEY684391
Unique NameEY684391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28
Identity = 81/174 (46.55%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  325 AIATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQMLVLGSTV*FPPIPQPNNMMGFLLARLPCLSNGSNPYQSPSQQYY-----GWRN*EMGLGHLFIPQTHPWQGPFNFRPQRLSTLRGEGVL-FPGFGTH 828
            AIATAR+KG++PER+GQPECQYYLKTGTCKFGATC+FHHP+DK G+AGRV+LN+ G     PNE+     YLRTGQ    G+T  F   PQP+NM+  L  R   +        +P QQ Y      W +        ++P    WQGP ++ P  L     +GV+  PG+ T+
Sbjct:   62 AIATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILG-YPLRPNES-ERAYYLRTGQ-CKFGNTCKFHH-PQPSNMV--LSMRGSTVYPTVQSPTTPGQQSYAAGITNWSS------SSYVPSPR-WQGPSSYAPLILP----QGVVSVPGWSTY 218          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.467e-27
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1
Query:  328 IATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*V-CLIYLRTGQMLVLGSTV*FPPIPQPNNMM 612
            IATAR++G+YPER+GQPEC+YYLKTGTCKFG TCKFHHPR+K GIAGRVSLN+ G   Y    N V C  +LRTG     G+     P PQP NMM
Sbjct:   73 IATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLG---YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMM 165          

HSP 2 Score: 70.0922 bits (170), Expect = 1.898e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  355 YPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTG 549
            +PER GQPECQ+Y+KTG CKFG  CKFHHPRD+        L+  G +   P E  +C+ Y R G
Sbjct:  271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIG-LPLRPGEP-LCVFYTRYG 333          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 70/121 (57.85%), Postives = 79/121 (65.29%), Query Frame = 1
Query:  325 AIATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQMLVLGSTV*FPPIPQPNNMMGFLLARLPCLSNGSNPYQSPSQQYY 687
            A+A AR+KG+YP+R+GQPECQYYLKTGTCKFGATCKFHHPR+K  IA RV LN  G     PNE   C  YLRTGQ    GST  F   PQP+N M  +  R    S G +   SPSQ  Y
Sbjct:   88 AVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALG-YPLRPNEK-ECAYYLRTGQ-CKFGSTCKFHH-PQPSNTM--VAVRGSVYSPGQS-VTSPSQHTY 201          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.502e-25
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 1
Query:  325 AIATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQ 552
            AIA+AR+KG+YPER+GQPECQYYLKTGTCKFG TCKFHHPR+K GIAGRV LN  G     P+E   C  YL+TGQ
Sbjct:  112 AIASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLG-YPLRPSEK-ECAYYLKTGQ 185          

HSP 2 Score: 22.7126 bits (47), Expect = 2.502e-25
Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = 2
Query:  626 RGSPVYPMVQTPTNPPANSIMVGGIKKWA 712
            RGSP+YP V   ++  A     G +  WA
Sbjct:  207 RGSPIYPSVH--SSATAGPPYTGTMASWA 233          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.939e-25
Identity = 68/121 (56.20%), Postives = 76/121 (62.81%), Query Frame = 1
Query:  325 AIATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQMLVLGSTV*FPPIPQPNNMMGFLLARLPCLSNGSNPYQSPSQQYY 687
            A+A AR+ G+YP RVGQPECQYYLKTGTCKFGATCKFHHPR+K  +A RV LNV G     PNE   C  YLRTGQ     ST  F   PQP+N M  +  R    S G +   SP Q  Y
Sbjct:   98 AVAAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLG-YPMRPNEK-ECAYYLRTGQ-CKFASTCKFHH-PQPSNTM--VAVRNSMYSPGQSA-TSPGQHTY 211          

HSP 2 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  328 IATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTG 549
            + T + +  +PER  QPECQ+Y+KTG CKFGA CKFHHP+++   A   +LN  G +   P E  VC  Y R G
Sbjct:  306 VYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLG-LPLRPGEP-VCTFYSRYG 377          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23
Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 1
Query:  328 IATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQMLVLGSTV*FPPIPQPNNMM 612
            IATARIKG+YPER+GQPEC++YLKTGTCKFG TCKFHHPR+K GI G VS+NV  +    PNE+  C  +LR GQ    G+     P  Q  N+M
Sbjct:   75 IATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVL-SYPLRPNED-DCSYFLRIGQCKFGGTCKFNHPQTQSTNLM 167          

HSP 2 Score: 68.5514 bits (166), Expect = 5.522e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  355 YPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTG 549
            +PER GQPECQ+Y+KTG CKFG  CKFHHPRD+        L+  G +   P E  +C+ Y R G
Sbjct:  240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVG-LPLRPGEP-LCVFYSRYG 302          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  331 ATARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFG-AIHYAPNEN*VCLIYLRTGQ 552
            AT R  G YPER G+P CQ+YLKTGTCKFGA+CKFHHP++ GG    V LN++G  +    NE   C  YL+TGQ
Sbjct:   79 ATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNE---CSYYLKTGQ 150          

HSP 2 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 1
Query:  355 YPERVGQPECQYYLKTGTCKFGATCKFHHPRDK 453
            +PER G+PECQYYLKTG CKFG +CKFHHPRD+
Sbjct:  286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDR 318          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  349 GDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGG--IAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQMLVLGSTV*F-----PPIPQPNNMMGFLLARLPCLSNGSNPYQSPSQQYYG 690
            G++PER+GQP CQ++++TGTCKFGA+CK+HHPR  GG      VSLN  G     P E   C  ++RTGQ    GST  +     P +  P+      L+  P +         PS Q YG
Sbjct:   92 GEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMG-FPLRPGEK-ECSYFMRTGQ-CKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYG 209          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 1
Query:  337 ARIKGDYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTG 549
            A  K + PER+GQP+C+Y+LKTG CK+G TCK+HHP+D+ G A  V  NV G       +   C  YLRTG
Sbjct:   81 AYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNG-AQPVMFNVIGLPMRLGEK--PCPYYLRTG 148          
BLAST of EY684391 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.705e-13
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 1
Query:  352 DYPERVGQPECQYYLKTGTCKFGATCKFHHPRDKGGIAGRVSLNVFGAIHYAPNEN*VCLIYLRTGQ 552
            DYPER GQP C+YY+KTGTCKFG  CK+HHP+  G +   +  N    I     E   C  Y++TGQ
Sbjct:  104 DYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKE---CSYYMKTGQ 167          
The following BLAST results are available for this feature:
BLAST of EY684391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ZFNL_PEA2.232e-2846.55Zinc finger CCCH domain-containing protein ZFN-lik... [more]
C3H33_ARATH2.467e-2763.54Zinc finger CCCH domain-containing protein 33 OS=A... [more]
C3H63_ORYSJ1.225e-2657.85Zinc finger CCCH domain-containing protein 63 OS=O... [more]
C3H12_ORYSJ2.502e-2571.05Zinc finger CCCH domain-containing protein 12 OS=O... [more]
C3H66_ORYSJ3.939e-2556.20Zinc finger CCCH domain-containing protein 66 OS=O... [more]
C3H57_ARATH1.267e-2358.95Zinc finger CCCH domain-containing protein 57 OS=A... [more]
C3H32_ARATH9.397e-1957.33Zinc finger CCCH domain-containing protein 32 OS=A... [more]
C3H58_ARATH3.695e-1540.50Zinc finger CCCH domain-containing protein 58 OS=A... [more]
C3H3_ARATH5.900e-1350.70Zinc finger CCCH domain-containing protein 3 OS=Ar... [more]
C3H6_ORYSJ7.705e-1349.25Zinc finger CCCH domain-containing protein 6 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-E07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684391 ID=EY684391; Name=EY684391; organism=Citrus sinensis; type=EST; length=879bp
AAAGAATGCCATTTTCTTGCCTGGCATTTGGATTTAACAGCTAATATTCT
CAGTTGATATAATTTTATTCTTTTCTTTTTTGGGTTTTTACTAGGTTCTT
TGCTGATTTAGGCTTTTTCTTTCTTTTCTTTTCTTTTTCCCTCCTGTTCT
CACTATAAGTTTTTCATACCAAAATGCTCCTTTGCACAAGCAACCACCTG
CCACCTTAAGACACTCATATTAGCATACTTCATGTATTAATGTTGTTTCT
TCTTTCCTGCTCAATGATGTACTTTTTGGCTGTTTGGAGATTGATATATT
CATTCAGGTTAAGGTAAATTGCAGGCCATTGCCACAGCAAGGATAAAGGG
TGATTACCCAGAACGAGTTGGACAACCTGAATGCCAGTACTATCTGAAGA
CAGGAACATGCAAGTTTGGAGCCACATGCAAGTTTCATCATCCAAGAGAC
AAGGGTGGGATTGCTGGAAGAGTCTCCTTAAATGTTTTTGGGGCTATCCA
CTACGCCCCGAATGAGAATTGAGTGTGCTTAATTTATCTAAGAACTGGAC
AAATGCTAGTTTTGGGAAGCACCGTGTAATTTCCCCCCATCCCTCAACCA
AACAACATGATGGGTTTCCTTTTGGCGAGGCTCCCCTGTTTATCCAATGG
TTCAAACCCCTACCAATCCCCCAGCCAACAGTATTATGGTTGGAGGAATT
AAGAAATGGGCCTAGGGCATCTTTTTATTCCCCAAACCCACCCTTGGCAA
GGTCCTTTCAATTTTAGGCCCCAAAGGCTTTCCACACTTCGGGGGGAAGG
GGTTCTATTTCCTGGTTTTGGAACACATTATCAGGGGTCCATCGTGGGGG
TTATTTTTCTTTTCTTTTCTTGAAAACTC
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