EY684381

Overview
NameEY684381
Unique NameEY684381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.329e-73
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK    ++IVKE SS L + G++  P+KVPF+P  GF G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYEEIVKEVSSYLKKVGYN--PDKVPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 5.188e-73
Identity = 149/203 (73.40%), Postives = 160/203 (78.82%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.776e-73
Identity = 148/203 (72.91%), Postives = 161/203 (79.31%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET+KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSKG   ++IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKG-RYEEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.972e-72
Identity = 148/203 (72.91%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.363e-72
Identity = 148/203 (72.91%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.392e-72
Identity = 147/203 (72.41%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +I+KE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIIKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.736e-72
Identity = 148/203 (72.91%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+ F+P  GF G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIHFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 9.784e-72
Identity = 147/203 (72.41%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 9.784e-72
Identity = 147/203 (72.41%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK     +IVKE SS L + G++  P+K+PF+P  GF G
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKA-RYDEIVKEVSSYLKKVGYN--PDKIPFVPISGFEG 198
[Close]
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.718e-71
Identity = 146/203 (71.92%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSS-LPEKGWDTTPEKVPFLPFPGFPG 696
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE+   +           F   V  K ++    K     PKYSK    ++IVKE SS L + G++  P+K+ F+P  GF G
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV--KQMICCCNKMDATTPKYSKS-RFEEIVKEVSSYLKKVGYN--PDKIAFIPISGFEG 198
The following BLAST results are available for this feature:
BLAST of EY684381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_WHEAT2.329e-7373.89Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_ORYSJ5.188e-7373.40Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_VICFA6.776e-7372.91Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_MANES1.972e-7272.91Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_TOBAC3.363e-7272.91Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_ARATH4.392e-7272.41Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_MAIZE5.736e-7272.91Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A_SOYBN9.784e-7272.41Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_SOLLC9.784e-7272.41Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A2_DAUCA3.718e-7171.92Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-D09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684381 ID=EY684381; Name=EY684381; organism=Citrus sinensis; type=EST; length=893bp
CCCACGCGTCCGTCTCAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTC
GCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGG
AGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAG
TCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCG
TGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCAT
TCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGT
ATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTG
CACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTA
CCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATTGACTCTACCACT
GGTGGTTTTGAAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATG
CTTTGCTTGCTTTCCACCCTTGGTGTGAAGCAAGATGATTTTGCTGCCTG
TAACAAAATGGACCCCACCACCCCCCAAGTATTCAAAGGGCTAAGGTACG
AAGAAAATTGTGAAGGAAGGCTCTTCCCTACCTGAAAAAGGTTGGGATAC
AACCCCCGAAAAAGTCCCATTTCTGCCCTTCCCTGGGTTTCCAGGGTGGA
CAACCTTGAATTGAAAGGTCTAACCCCCCCTGGACGGGGACCAGGGGTCA
AACCCTGCTGGAGACCTCTTTGAACAAATTAATAGGACCCAAAAAAGGCC
CCCCAAAAAAACCCCCCTTCCCTTTGGCCCCCCCCCAGAAAGTGGGAAAA
AAAATTGGGGGGGGGATTGGGGACCCCCCCCCCCCAGGGGGGG
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