EY684380

Overview
NameEY684380
Unique NameEY684380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB_SPIOL (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 7.258e-20
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1
Query:    1 CVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVG 147
            CVV+LGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVK+QRV APVG
Sbjct: 1404 CVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQRVTAPVG 1452          
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB1_ARATH (Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18
Identity = 42/49 (85.71%), Postives = 47/49 (95.92%), Query Frame = 1
Query:    1 CVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVG 147
            CVVVLGKVGRNVAAGMTGGLAY+LDEDDTL+PK+N+EIVK+QRV AP G
Sbjct: 1535 CVVVLGKVGRNVAAGMTGGLAYLLDEDDTLLPKINREIVKIQRVTAPAG 1583          
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB_MAIZE (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 1
Query:    1 CVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVG 147
            CVVVLGK GRNVAAGMTGGLAYILDEDDTL+PKVNKEIVK+QRV AP G
Sbjct: 1501 CVVVLGKAGRNVAAGMTGGLAYILDEDDTLVPKVNKEIVKMQRVNAPAG 1549          
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB2_ARATH (Ferredoxin-dependent glutamate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 42/49 (85.71%), Postives = 48/49 (97.96%), Query Frame = 1
Query:    1 CVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVG 147
            CVV+LGKVGRNVAAGMTGGLAYILDED+TL+PK+NKEIVK+QRV +PVG
Sbjct: 1510 CVVILGKVGRNVAAGMTGGLAYILDEDNTLLPKMNKEIVKIQRVTSPVG 1558          
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB_PORYE (Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis GN=gltB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1
Query:    4 VVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVGPDAVE 162
            +VVLGK GRNV AGMTGGLAY LDED+  I +VN EIVK+QRVI   G + ++
Sbjct: 1431 IVVLGKAGRNVGAGMTGGLAYFLDEDENFIDRVNSEIVKIQRVITKAGEEQLK 1483          
BLAST of EY684380 vs. ExPASy Swiss-Prot
Match: GLTB_PORPU (Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea GN=gltB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.265e-12
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 1
Query:    4 VVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKVQRVIAPVG 147
            +VVLGK GRNV AGMTGGLAY LDE++  I +VN EIVKVQRVI   G
Sbjct: 1431 IVVLGKAGRNVGAGMTGGLAYFLDEENKFIERVNSEIVKVQRVITKAG 1478          
The following BLAST results are available for this feature:
BLAST of EY684380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GLTB_SPIOL7.258e-2093.88Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB1_ARATH1.369e-1885.71Ferredoxin-dependent glutamate synthase 1, chlorop... [more]
GLTB_MAIZE1.788e-1889.80Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB2_ARATH2.335e-1885.71Ferredoxin-dependent glutamate synthase 2, chlorop... [more]
GLTB_PORYE5.038e-1364.15Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTB_PORPU3.265e-1270.83Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-D08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684380 ID=EY684380; Name=EY684380; organism=Citrus sinensis; type=EST; length=430bp
TGTGTCGTTGTACTTGGAAAAGTGGGTAGAAATGTTGCTGCTGGAATGAC
TGGAGGTTTGGCATACATTCTCGATGAGGATGATACTCTCATCCCCAAGG
TCAATAAGGAGATAGTGAAGGTCCAGAGGGTGATTGCTCCTGTTGGGCCC
GATGCAGTTGAAGAGCCTTATTGAAAGCCCATGTTGTAAGTGTTCCCCAT
GAACTGCCTGAACATTTAGCTATTGACATTTAAATTCAAATAATGGTGAA
TGGAAATTATGAAATTCTGCCAACTTTCCAAGAATTTTGGAAAATTTTAT
GGTTGGGGGCCGTTTGGTTAATTTAATTAAAGGACGCCCCCCACCACTTG
AAAACTCAAACCTAAAATCCTAAATAAGGGGCGCCCCCCCTTTCCCGGTT
TATACCTAGGCCCTGGGGCCCCAGGGTTTG
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