EY684375

Overview
NameEY684375
Unique NameEY684375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.022e-73
Identity = 137/169 (81.07%), Postives = 151/169 (89.35%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            MAF KAQK+KAYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGEDYSVEPA+TRRPFRALLDVGLI+   G       +G++  G
Sbjct:    1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGG 169          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 2.518e-72
Identity = 133/169 (78.70%), Postives = 149/169 (88.17%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP ++RRPFRALLDVGLI+   G       +G++  G
Sbjct:    1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGG 169          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 3.289e-72
Identity = 133/169 (78.70%), Postives = 149/169 (88.17%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP ++RRPFRALLDVGLI+   G       +G++  G
Sbjct:    1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGG 169          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 5.805e-69
Identity = 128/167 (76.65%), Postives = 142/167 (85.03%), Query Frame = 2
Query:   80 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            FVK QK+ AY+KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPA+ RRPFRALLDVGLI+   G       +G++  G
Sbjct:    4 FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGG 170          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.689e-68
Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 2
Query:   80 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            FVK QK+ AY KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPA+ RRPFRALLDVGLI+   G       +G++  G
Sbjct:    4 FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGG 170          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.981e-65
Identity = 126/167 (75.45%), Postives = 138/167 (82.63%), Query Frame = 2
Query:   80 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            FVK QK+ AYFKRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV   TNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D EYEGNVEATGEDY VEPA+ RRPFRALLDVGLI+   G       +G++  G
Sbjct:    7 FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGG 170          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.142e-55
Identity = 108/170 (63.53%), Postives = 129/170 (75.88%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVE-PAETRRPFRALLDVGLIKNNHGKPCLWCSEGSIKWG 580
            M FVK  K+KAYFKR+QVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG++VGLTNYAAAYCTGLLLARR+L  L + D+Y G  +  GED++VE   +  RPFRA LDVGL +   G       +G++  G
Sbjct:    1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGG 170          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.975e-54
Identity = 100/153 (65.36%), Postives = 123/153 (80.39%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAET-RRPFRALLDVGLIKN 529
            M F++  K+KAYF+RFQVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D ++ G VEA GE Y VE  +  RRPF+ALLDVG IKN
Sbjct:    1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVG-IKN 152          

HSP 2 Score: 38.5058 bits (88), Expect = 4.975e-54
Identity = 29/74 (39.19%), Postives = 41/74 (55.41%), Query Frame = 3
Query:  507 LMLGSSKTTTGNRVFGALKGALNGGIGHSSYGQEVGWFFKGMA------AAWWLRVHRRIIYGGKLVAAYLESL 710
            L +G    TTGNRVFGALKGA +GG+ H  + ++    F G +       ++  + HR  I+G   VA Y+E L
Sbjct:  146 LDVGIKNVTTGNRVFGALKGACDGGL-HVPHSEK---RFPGYSVDDENNGSYDAQAHRDRIFGTH-VANYMEYL 214          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.454e-54
Identity = 100/153 (65.36%), Postives = 123/153 (80.39%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAET-RRPFRALLDVGLIKN 529
            M F++  K+KAYF+RFQVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D ++ G VEA GE Y VE  +  RRPF+ALLDVG IKN
Sbjct:    1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVG-IKN 152          

HSP 2 Score: 38.1206 bits (87), Expect = 8.454e-54
Identity = 29/74 (39.19%), Postives = 40/74 (54.05%), Query Frame = 3
Query:  507 LMLGSSKTTTGNRVFGALKGALNGGIGHSSYGQEVGWFFKGMA------AAWWLRVHRRIIYGGKLVAAYLESL 710
            L +G    TTGNRVFGALKGA +GG+ H  + ++    F G +        +  + HR  I+G   VA Y+E L
Sbjct:  146 LDVGIKNVTTGNRVFGALKGACDGGL-HVPHSEK---RFPGYSVDDENNGTYDAQAHRDRIFGTH-VANYMEYL 214          
BLAST of EY684375 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.618e-53
Identity = 103/155 (66.45%), Postives = 121/155 (78.06%), Query Frame = 2
Query:   74 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKNNHG 538
            M  VK  K+KAYFKR+QVK KRRREGKTDY AR RL  QDKNKYNTPKYR +VR TNKDI+AQ+  + I GD V+A+AYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D  Y+G+ E TGEDY+VE    R PF+A+LD+GL +   G
Sbjct:    1 MGLVKVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDIVAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTG 155          
The following BLAST results are available for this feature:
BLAST of EY684375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
RL5_CUCSA1.022e-7381.0760S ribosomal protein L5 OS=Cucumis sativus GN=RPL... [more]
RL52_ARATH2.518e-7278.7060S ribosomal protein L5-2 OS=Arabidopsis thaliana... [more]
RL51_ARATH3.289e-7278.7060S ribosomal protein L5-1 OS=Arabidopsis thaliana... [more]
RL51_ORYSI5.805e-6976.6560S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL51_ORYSJ1.689e-6876.6560S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL52_ORYSJ2.981e-6575.4560S ribosomal protein L5-2 OS=Oryza sativa subsp. ... [more]
RL5_SUBDO2.142e-5563.5360S ribosomal protein L5 OS=Suberites domuncula GN... [more]
RL5_THEPA4.975e-5465.3660S ribosomal protein L5 OS=Theileria parva GN=RPL... [more]
RL5_THEAN8.454e-5465.3660S ribosomal protein L5 OS=Theileria annulata GN=... [more]
RL5_CAEBR2.618e-5366.4560S ribosomal protein L5 OS=Caenorhabditis briggsa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-C11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684375 ID=EY684375; Name=EY684375; organism=Citrus sinensis; type=EST; length=882bp
CCGGGGAATTTCCCGGGTCGACCCCGCGTCCGTCCTTCCCTCTCCTTTCT
CTTACAACTCGAAAGTTCGAGCAATGGCCTTTGTCAAGGCTCAGAAATCC
AAGGCTTACTTCAAGCGGTTCCAGGTTAAGTACAAGAGAAGAAGAGAGGG
AAAGACTGATTACAGAGCTAGAATTCGCTTGATTAATCAGGACAAGAATA
AGTACAACACACCCAAATACCGATTTGTTGTCCGATTCACAAACAAGGAC
ATCATTGCACAGATAGTGTCAGCCAACATTGTTGGTGATTCTGTCCTTGC
TGCTGCTTATGCCCATGAGCTTCCTCGTTATGGACTTGAAGTAGGTCTTA
CAAACTATGCTGCAGCTTATTGCACTGGGCTTCTTTTGGCTCGTCGTGTC
TTGAAGATGCTTGAAATGGATGATGAGTATGAGGGCAATGTTGAGGCTAC
CGGAGAGGATTACTCTGTCGAACCTGCTGAAACAAGGAGGCCATTCCGTG
CTCTCCTTGATGTTGGGCTCATCAAAAACAACCACGGGAAACCGTGTCTT
TGGTGCTCTGAAGGGAGCATTAAATGGGGGAATTGGACATTCCTCCTATG
GACAAGAGGTTGGCTGGTTTTTCAAAGGGATGGCAGCCGCCTGGTGGCTG
AGGGTCCACCGCAGGATTATCTATGGGGGGAAATTGGTGGCGGCTTACTT
GGAGTCCTTGGTGGGAGGAAGAACCACGAGAATTATTAATCTCTCCTTCT
CCGAAATACTTCACATAAGGGAATTGAATGTTGATGGGTTTGGGAGGATC
TGGAACAAAAAGGGTTTATGGTGGACTATTGGGGGGAATTCCCAGCATGG
GAAAAATTCTGGGAAAGGCAGCCTCCCCCAGA
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