EY684370

Overview
NameEY684370
Unique NameEY684370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_DICDI (Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 8.768e-84
Identity = 155/241 (64.32%), Postives = 184/241 (76.35%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQGD+IELH+KR G RLDH+E+ RKK AR  HKRS IAQK  G+K K++ KKRY+EKA MKKT+AMH+E ++++  DD+V+EGAVPAYLLDRE  +RAKVLSN +KQKRKEKAGKW+VPLPKVR ++EDEMFKV++SGKR+ K WKR VTK TFVG GFTRKPPKYERFIRP+GLRF KAHVTHPELK T   L    +KKNP  S  Y  L ++ +GTI E               VWG
Sbjct:    1 MPQGDHIELHQKRFGRRLDHYEKVRKKTARAAHKRSAIAQKVTGLKAKLYNKKRYSEKAEMKKTIAMHQERTNKKASDDKVKEGAVPAYLLDREGVSRAKVLSNMVKQKRKEKAGKWDVPLPKVRAISEDEMFKVVKSGKRQKKAWKRFVTKVTFVGEGFTRKPPKYERFIRPTGLRFKKAHVTHPELKSTFY-LDILSVKKNP-QSPTYTQLGVITKGTILEVNVSDLGLVTQTGKVVWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_HUMAN (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=TINP1 PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.310e-79
Identity = 148/241 (61.41%), Postives = 181/241 (75.10%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIELHRKR GYRLD+ E+KRKKE+RE H+RS+ A+K +G+K K++ K+R+AEK  MKKT+ MHE+ ++++K D++  +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPLPKVR   E E+ KVIR+GKR+ K WKRMVTK  FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK T   L   G+KKNP  S +Y  L ++ +GT+ E               +WG
Sbjct:    1 MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATF-CLPILGVKKNP-SSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_MOUSE (Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Tinp1 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.711e-79
Identity = 148/241 (61.41%), Postives = 180/241 (74.69%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK  MKKT+ MHE+ ++++K D++  +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPLPKVR   E E+ KVIR+GKR+ K WKRMVTK  FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK T   L   G+KKNP  S +Y  L ++ +GT+ E               +WG
Sbjct:    1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATF-CLPILGVKKNP-SSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_BOVIN (Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=TINP1 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.711e-79
Identity = 148/241 (61.41%), Postives = 180/241 (74.69%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK  MKKT+ MHE+ ++++K D++  +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWEVPLPKVR   E E+ KVIR+GKR+ K WKRMVTK  FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK T   L   G+KKNP  S +Y  L ++ +GT+ E               +WG
Sbjct:    1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATF-CLPILGVKKNP-SSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_RAT (Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Tinp1 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 3.227e-78
Identity = 145/241 (60.17%), Postives = 179/241 (74.27%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIELHRKR GYRLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK  MKKT+ MHE+ ++++K D++  +GAVPAYLLDRE  +RAKVLSN IKQKRKEKAGKWE PLPKVR   E E+ KVIR+GKR+ K W+RMVTK  FVG GFTRKPPKYE+FIRP GLRF KAHVTHPELK T   L   G+KKNP  S +Y  L ++ +GT+ E               +WG
Sbjct:    1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWESPLPKVRAQGETELLKVIRTGKRKKKAWRRMVTKVCFVGDGFTRKPPKYEKFIRPMGLRFKKAHVTHPELKATF-CLPILGVKKNP-SSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_ASHGO (Ribosome biogenesis protein NSA2 OS=Ashbya gossypii GN=NSA2 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.077e-65
Identity = 136/242 (56.20%), Postives = 164/242 (67.77%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIE H K++G RLDH ERKRK+EARE HK SE AQK  G KGK FAKKRYAEK  M+K +  HE+S  +         G A+PAYLLDRE    AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKV+++GK +TK WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T+  L   G+KKNP  S +Y  L +L +GTI E               VWG
Sbjct:    1 MPQNEYIEQHIKKHGRRLDHEERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKLKGAAKPLEDSGEALPAYLLDREQANSAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVVKTGKSKTKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTV-FLPILGVKKNP-QSPMYTQLGVLTKGTIIEVNVSELGMVTSGGKVVWG 240          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_USTMA (Ribosome biogenesis protein NSA2 OS=Ustilago maydis GN=NSA2 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.406e-65
Identity = 132/239 (55.23%), Postives = 160/239 (66.95%), Query Frame = 3
Query:   21 QGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            Q DYIE H +R+G RLDH ER+RK+ AREVHK S +AQK  G+K KM  KKR  EK  MKKTL  HEE   ++         A+P YLLDRE    AK LS+ +K++RK+KA ++ VPLP+VR +AEDE FKVI++GKR+ K WKRMVTK TFVG  FTRKPPK ERFIRP GLR+ KAHVTHPELK +  +L   G+KKNP  S +Y  L +L +GTI E               VWG
Sbjct:   14 QNDYIEEHIRRHGRRLDHEERQRKRAAREVHKASAVAQKVTGLKAKMLNKKRRNEKIQMKKTLKAHEERDVKQASTSSDPNQALPTYLLDREGQKDAKALSSAVKERRKDKAARYSVPLPQVRGIAEDEAFKVIKTGKRKQKGWKRMVTKPTFVGESFTRKPPKLERFIRPMGLRYNKAHVTHPELKASF-NLPIVGVKKNP-QSPLYTQLGVLTKGTIIEVNVSELGMTTTTGKVVWG 250          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_CANGA (Ribosome biogenesis protein NSA2 OS=Candida glabrata GN=NSA2 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.406e-65
Identity = 135/242 (55.79%), Postives = 166/242 (68.60%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ DYIE H K++G RLD+ ERKRK+EAREVHK +E AQK  G KGK FAKKRYAEK  M+K +  HE+S ++         G A+P YLLDRE T  AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKV+++GK ++K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T+  L   G+KKNP  S +Y  L +L +GTI E               VWG
Sbjct:    1 MPQNDYIERHIKQHGRRLDYEERKRKREAREVHKVAEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKAKGSSKPLADNGEALPTYLLDREQTNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVVKTGKSKSKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTV-FLPILGVKKNP-QSPMYTQLGVLTKGTIIEVNVSELGMVTSGGKVVWG 240          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_SCHPO (Ribosome biogenesis protein nsa2 OS=Schizosaccharomyces pombe GN=nsa2 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.399e-65
Identity = 132/241 (54.77%), Postives = 163/241 (67.63%), Query Frame = 3
Query:   15 MPQGDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFEXXXXXXXXXXXXXXKVWG 737
            MPQ +YIE   +++G R DH ERKRKK ARE H  S  AQK  GIK K++ +KR  EK  MKKT+  HEE ++ ++  D   +GAVP YLLDRE  ++AK+LS+ +KQKRKEKA K+ VPLP+VR VAE+EMFKVIR+GK +   WKRM+TKATFVG GFTR+P KYERFIRP  LR  KA+VTH EL  T+Q L   G+KKNP  S  Y  L +L +GT+ E               VWG
Sbjct:    1 MPQNEYIEESIRKHGRRFDHEERKRKKAAREAHDASLYAQKTRGIKAKLYQEKRRKEKIQMKKTIKQHEERNATQRGSDAQTQGAVPTYLLDREQESQAKMLSSAVKQKRKEKAAKYSVPLPQVRGVAEEEMFKVIRTGKSKKNSWKRMITKATFVGDGFTRRPVKYERFIRPMALRQKKANVTHKELGVTMQ-LPIIGVKKNP-QSPTYTQLGVLTKGTVIEVNVSELGLVTSGGKVVWG 239          
BLAST of EY684370 vs. ExPASy Swiss-Prot
Match: NSA2_CRYNE (Ribosome biogenesis protein NSA2 OS=Cryptococcus neoformans GN=NSA2 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.092e-65
Identity = 129/217 (59.45%), Postives = 161/217 (74.19%), Query Frame = 3
Query:   33 IELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTLQSLKSFGMKKNP*WSDVYPLLVLLLRGTIFE 683
            +E HRKR+G RLD+ E+KRK+ ARE HK S  AQK  G K K+   +R+AEK  MKKTL  H+E + ++K D  V+EGA+PAYLLDR+    AK LS+ +K +RK++A K+ VPLPKVR +AE+EMFKVI++GK ++K WKRMV KATFVG GFTRKP K ERFIRP GLR TKA+VTHPELK T Q L   G+KKNP  S +Y  L +L +GTI E
Sbjct:    1 MEEHRKRHGRRLDYEEKKRKRTAREAHKASADAQKIFGHKAKLHHARRHAEKVQMKKTLKAHDERNVKQKDDGAVKEGALPAYLLDRDGQKDAKALSSAVKDRRKDRAAKYSVPLPKVRGIAEEEMFKVIKTGKSKSKSWKRMVNKATFVGEGFTRKPVKLERFIRPMGLRMTKANVTHPELKTTFQ-LPILGVKKNP-QSPLYTSLGVLTKGTILE 215          
The following BLAST results are available for this feature:
BLAST of EY684370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
NSA2_DICDI8.768e-8464.32Ribosome biogenesis protein NSA2 homolog OS=Dictyo... [more]
NSA2_HUMAN1.310e-7961.41Ribosome biogenesis protein NSA2 homolog OS=Homo s... [more]
NSA2_MOUSE1.711e-7961.41Ribosome biogenesis protein NSA2 homolog OS=Mus mu... [more]
NSA2_BOVIN1.711e-7961.41Ribosome biogenesis protein NSA2 homolog OS=Bos ta... [more]
NSA2_RAT3.227e-7860.17Ribosome biogenesis protein NSA2 homolog OS=Rattus... [more]
NSA2_ASHGO1.077e-6556.20Ribosome biogenesis protein NSA2 OS=Ashbya gossypi... [more]
NSA2_USTMA1.406e-6555.23Ribosome biogenesis protein NSA2 OS=Ustilago maydi... [more]
NSA2_CANGA1.406e-6555.79Ribosome biogenesis protein NSA2 OS=Candida glabra... [more]
NSA2_SCHPO2.399e-6554.77Ribosome biogenesis protein nsa2 OS=Schizosaccharo... [more]
NSA2_CRYNE4.092e-6559.45Ribosome biogenesis protein NSA2 OS=Cryptococcus n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-C05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684370 ID=EY684370; Name=EY684370; organism=Citrus sinensis; type=EST; length=909bp
AAAGCCCTTACGAAATGCCGCAAGGAGATTACATAGAGCTTCACAGGAAG
CGAAATGGCTACCGTCTCGATCACTTCGAGCGCAAGCGCAAGAAGGAGGC
GCGTGAAGTCCATAAGCGCTCCGAAATTGCCCAAAAGGCTTTGGGTATTA
AGGGCAAGATGTTTGCTAAAAAACGCTATGCTGAGAAGGCTCTCATGAAG
AAAACTTTGGCTATGCATGAAGAGTCATCAAGTCGTAGAAAGGTGGATGA
TGAAGTTCAAGAGGGTGCTGTTCCTGCTTATTTGCTTGATCGTGAAAACA
CAACAAGAGCGAAGGTGCTTAGCAACACTATAAAGCAAAAAAGAAAAGAG
AAAGCTGGAAAGTGGGAGGTACCCCTTCCCAAGGTTAGGCCAGTAGCGGA
AGATGAAATGTTTAAAGTCATCAGATCTGGTAAACGAAGAACCAAGCAAT
GGAAGAGGATGGTCACAAAGGCCACATTTGTTGGACCTGGTTTTACAAGA
AAACCTCCCAAGTATGAGAGGTTCATTCGTCCTTCGGGTTTGCGTTTTAC
CAAAGCTCATGTAACTCACCCTGAACTTAAGTGCACCCTTCAATCTTTGA
AATCATTTGGAATGAAAAAAAATCCCTAATGGTCCGATGTATACCCTCTC
TTGGTGTTATTACTAAGGGGGACAATCTTTGAGGGGAATGGCCATTGAAT
TGGGGCCGGGAACCACCACCTGGGAAAAGTTTGGGGGGGGAAATTATGCA
CAAATGAAAAAATAATCCAAAAAAAAGAAGGGTTGGGAAAAATGGCCTTT
CTATTTTGTTTTAGAAAGGGAAACGGGAAATCCTTTTTACATGGCTTGTG
TTGCGCGAAAAATTTTAATGGGTTTTAAATTTTCCAACACTTCTTTGGGG
GTTTGAAAG
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