EY684365

Overview
NameEY684365
Unique NameEY684365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length443
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.853e-35
Identity = 74/94 (78.72%), Postives = 83/94 (88.30%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 283
            GRLAMIGFVAA+GVEI+KGQ +  QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS   M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct:  103 GRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.979e-31
Identity = 61/94 (64.89%), Postives = 83/94 (88.30%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 283
            GR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct:  104 GRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.165e-25
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 283
            GRLAM+GFVAAL VE ++G  +  Q+     G+AWFL T+ + +VASL+PL +G SVESKS G  ++DAELWNGRFAMLGLVALA TEF+ G   V
Sbjct:  134 GRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.885e-22
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 283
            GRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAMLGLVALA TE + G   +
Sbjct:   76 GRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.088e-21
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 271
            GRLAM+GFV AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:   71 GRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
BLAST of EY684365 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.206e-12
Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = 2
Query:    2 GRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSD--GFMTSDAELWNGRFAMLGLVALAFTEFVKG 271
            GRLAM+GFVAALG E+S G+ V  QL D      L T VL + ASL+P F       K D  G  T DAE+ NGRFAM+G  A+   E ++G
Sbjct:   82 GRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQG 168          
The following BLAST results are available for this feature:
BLAST of EY684365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ELI_PEA3.853e-3578.72Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL1.979e-3164.89Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI5_HORVU6.165e-2560.42High molecular mass early light-inducible protein ... [more]
ELI9_HORVU4.885e-2254.74Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU1.088e-2156.04Low molecular mass early light-inducible protein H... [more]
CBR_DUNBA1.206e-1248.91Carotene biosynthesis-related protein CBR, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-B10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684365 ID=EY684365; Name=EY684365; organism=Citrus sinensis; type=EST; length=443bp
CGGGAGGCTTGCGATGATTGGGTTCGTGGCTGCATTGGGGGTGGAGATAT
CCAAGGGTCAGGATGTGTTTGCCCAGTTATCAGACGGTGGGGTTGCCTGG
TTCTTGGGGACCAGTGTTTTGCTCACGGTTGCGTCCCTGGTTCCTTTGTT
TAAAGGTGTCAGCGTGGAGTCTAAATCGGATGGGTTCATGACTTCGGATG
CTGAGTTGTGGAATGGGAGGTTTGCTATGCTGGGCCTTGTTGCTTTGGCT
TTCACCGAGTTTGTTAAGGGTGGCACCCTTGTTTAAGCTTAATTTTGTTT
AGATCTGTAGATCTGTATTTTTTTTAACTAATTAATGTATGAGATCCTAC
TGTAATTAAATCTCTATTTCTCATGCCNAAAAAAAAAAAAAAAAAAAAAA
AAGAAGGAGAGAGAAAAATAAAAAAAAAAAGAAAAAAAATGGG
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