EY684364

Overview
NameEY684364
Unique NameEY684364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684364 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.255e-12
Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 2 
Query:   59 LQQISIAYCGNLVSFPQGGLPCAKLTRLTILDCKRLEALPKGLHNLTSLQELRI--GGELPSLEEDGLPTNLQSVYILGNMEIWKSMIERGR-GFHRFSSLQTLIIINCDDDMVSFPLEDKRLGTALPLPASLTSLWIYNFPNLERLS-SSIVDLQNLTPLGLYHCPQLK 556
            L+ + I  C NL +FPQGGLP  KL+ + + +CK+L+ALP+ L  LTSL  L I    E+ ++   G P+NL+++ I     +   +  R   G     +L+ L I   ++D+ SFP E         LP S+ SL I  F NL+ L+     D + +  + +  C +L+
Sbjct: 1217 LESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGGGFPSNLRTLCI----SLCDKLTPRIEWGLRDLENLRNLEIDGGNEDIESFPEEGL-------LPKSVFSLRISRFENLKTLNRKGFHDTKAIETMEISGCDKLQ 1375
The following BLAST results are available for this feature:
BLAST of EY684364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRL21_ARATH2.255e-1232.94Putative disease resistance protein At3g14460 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-B09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684364 ID=EY684364; Name=EY684364; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGAAATCTGAAAATTTTACCGAGTGGTTTACAAAATC
TCCGCCAGCTTCAACAGATTAGCATAGCGTATTGTGGAAATCTAGTGTCC
TTTCCCCAAGGGGGATTGCCTTGTGCGAAACTCACGAGGCTGACGATACT
TGATTGTAAGAGACTAGAGGCCTTACCCAAGGGATTGCACAATCTGACCT
CTCTTCAAGAATTAAGAATAGGAGGTGAGCTTCCAAGCCTTGAAGAAGAT
GGCCTTCCCACCAACCTTCAGTCAGTTTATATTTTGGGTAATATGGAGAT
TTGGAAGTCAATGATTGAGCGGGGCCGGGGATTTCACAGATTCTCCTCTC
TACAAACTCTTATAATCATTAATTGTGATGACGATATGGTGTCATTTCCA
CTAGAGGACAAAAGATTAGGGACCGCGCTTCCTCTTCCTGCCTCTCTAAC
ATCTCTGTGGATTTACAATTTTCCAAATCTGGAACGCCTATCTTCTTCAA
TTGTTGATCTTCAAAACCTCACTCCCTTGGGTCTCTATCATTGTCCCCAG
CTCAAATACCTTTCCGGAGAAGGGCCTGCCTTCCTCCTTTTTTGCAATTA
AAATCGTGGATGGTCCTTTGATAAAAAAAAGTGGCAGAAAAGGATGGAAG
GAAAATATTGGGGACTTGTTAACCCCTATTCCCTCTTGCTGTTTTAACCG
GGGAAAGGGGGTTTTTTTTTGAACACCCCCCCGAAAGGAACAATCTACCA
AAAGAACGACCCAACCGAGGGACAAAGGAAAAATTTTTTTTTAATTATTT
TTTTTAAAAAGAAATTGGGCGGGGGATTTATGGGTTGGGGGGGTTAAAGG
GGTTTTTCAAAAAAAAAAATTTTTTTATTTACACA
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