EY684358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.906e-77 Identity = 149/222 (67.12%), Postives = 176/222 (79.28%), Query Frame = 3 Query: 66 TSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 TSTMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYRIAG + P +F+PLG AD+PE + + ++ KNGR+A Sbjct: 3 TSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL-YPGGSFDPLGLADDPEAFAELKV-KEIKNGRLA 222
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76 Identity = 144/220 (65.45%), Postives = 175/220 (79.55%), Query Frame = 3 Query: 69 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 ST ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG+ + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 221
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76 Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 3 Query: 69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 STMALSS SF GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 STMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 222
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76 Identity = 145/220 (65.91%), Postives = 174/220 (79.09%), Query Frame = 3 Query: 69 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 ST ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 221
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.491e-75 Identity = 145/221 (65.61%), Postives = 175/221 (79.19%), Query Frame = 3 Query: 69 STMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYG NRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFK + IF +G LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG+ + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 STMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 222
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.543e-75 Identity = 145/219 (66.21%), Postives = 173/219 (79.00%), Query Frame = 3 Query: 69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 +TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ I MGA EGYR+AG + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 ATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 220
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 4.338e-75 Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 3 Query: 69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYRIAG + P +F+PLG A++PE + + ++ KNGR+A Sbjct: 4 ATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 220
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 9.664e-75 Identity = 144/221 (65.16%), Postives = 172/221 (77.83%), Query Frame = 3 Query: 69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMP--TFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG +RVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WA + I MGA EGYR+AG+ P +G P +F+PLG A +PE + + ++ KNGR+A Sbjct: 4 STMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGP--LGEAEDLLYPGGSFDPLGLATDPEAFAELKV-KEIKNGRLA 221
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.262e-74 Identity = 146/221 (66.06%), Postives = 173/221 (78.28%), Query Frame = 3 Query: 69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG + P +F+PLG AD+PE + + ++ KNGR+A Sbjct: 4 STMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPL-YPGGSFDPLGLADDPEAFAELKV-KEIKNGRLA 222
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.648e-74 Identity = 144/221 (65.16%), Postives = 175/221 (79.19%), Query Frame = 3 Query: 69 STMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722 +TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+ HAQSI+ WAC+ + MGA EGYR+AG + P +F+PLG A++PE + + + KNGR+A Sbjct: 4 ATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KHIKNGRLA 222 The following BLAST results are available for this feature:
BLAST of EY684358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684358 ID=EY684358; Name=EY684358; organism=Citrus sinensis; type=EST; length=907bpback to top |