EY684358

Overview
NameEY684358
Unique NameEY684358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.906e-77
Identity = 149/222 (67.12%), Postives = 176/222 (79.28%), Query Frame = 3
Query:   66 TSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            TSTMALSSS F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYRIAG     +  P      +F+PLG AD+PE +   +  ++ KNGR+A
Sbjct:    3 TSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL-YPGGSFDPLGLADDPEAFAELKV-KEIKNGRLA 222          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76
Identity = 144/220 (65.45%), Postives = 175/220 (79.55%), Query Frame = 3
Query:   69 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            ST ALSS F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG+    +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 221          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76
Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 3
Query:   69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            STMALSS SF GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG     +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 STMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 222          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.924e-76
Identity = 145/220 (65.91%), Postives = 174/220 (79.09%), Query Frame = 3
Query:   69 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            ST ALSS F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG     +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 221          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.491e-75
Identity = 145/221 (65.61%), Postives = 175/221 (79.19%), Query Frame = 3
Query:   69 STMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            STMALSSS F GKAV L+PS +E++  G+++MRKT SK+  VSS SPWYG NRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFK  + IF +G LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG+    +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 STMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 222          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.543e-75
Identity = 145/219 (66.21%), Postives = 173/219 (79.00%), Query Frame = 3
Query:   69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            +TMALSS SF G+AV L+PS  E++  GR+SMRKT +K V+S SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ I MGA EGYR+AG     +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 ATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 220          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.338e-75
Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 3
Query:   69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            +TMALSS SF G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYRIAG     +  P      +F+PLG A++PE +   +  ++ KNGR+A
Sbjct:    4 ATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLA 220          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.664e-75
Identity = 144/221 (65.16%), Postives = 172/221 (77.83%), Query Frame = 3
Query:   69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMP--TFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            STMALSS +F GKAV L+P  +E+   GR++MRKT   +  SGSPWYG +RVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WA + I MGA EGYR+AG+ P  +G       P  +F+PLG A +PE +   +  ++ KNGR+A
Sbjct:    4 STMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGP--LGEAEDLLYPGGSFDPLGLATDPEAFAELKV-KEIKNGRLA 221          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.262e-74
Identity = 146/221 (66.06%), Postives = 173/221 (78.28%), Query Frame = 3
Query:   69 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            STMALSS SF G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG     +  P      +F+PLG AD+PE +   +  ++ KNGR+A
Sbjct:    4 STMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPL-YPGGSFDPLGLADDPEAFAELKV-KEIKNGRLA 222          
BLAST of EY684358 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.648e-74
Identity = 144/221 (65.16%), Postives = 175/221 (79.19%), Query Frame = 3
Query:   69 STMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLNRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELKVIHCKWAMLGALGCVFPELLAPHGIKFGEDVWFKAEAHIFGEGRLDYLGNPA*FHAQSIMEHWACRWI*MGADEGYRIAGKAPR*IG*PH*TQMPTFNPLG*ADNPEGY*RTQG*RKTKNGRVA 722
            +TMALSSS F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL+VIHC+WAMLGALGCVFPELLA +G+KFGE VWFKA + IF EG LDYLGNP+  HAQSI+  WAC+ + MGA EGYR+AG     +  P      +F+PLG A++PE +   +  +  KNGR+A
Sbjct:    4 ATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL-YPGGSFDPLGLAEDPEAFAELKV-KHIKNGRLA 222          
The following BLAST results are available for this feature:
BLAST of EY684358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CB2G_SOLLC7.906e-7767.12Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB25_NICPL3.924e-7665.45Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB24_TOBAC3.924e-7666.52Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC3.924e-7665.91Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB23_NICPL1.491e-7565.61Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB22_TOBAC2.543e-7566.21Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2B_SOLLC4.338e-7566.21Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB21_SINAL9.664e-7565.16Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB27_TOBAC1.262e-7466.06Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_TOBAC1.648e-7465.16Chlorophyll a-b binding protein 50, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-B03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684358 ID=EY684358; Name=EY684358; organism=Citrus sinensis; type=EST; length=907bp
ACAAACACAACAGAGAACGGCGGGACGGGTCGGGATTCCCGGGTCCAACC
CCGCGTCCGAATGGCACCTCAACAATGGCTCTCTCCTCATCATTCGTCGG
CAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCAATGGTGGCC
GCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCCCG
TGGTACGGCCTAAACAGAGTCAAGTACTTGGGCCCATTCTCTGGCGAGCC
CCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTTGGGACACAG
CCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAAAACCGTGAACTCAAA
GTCATCCACTGCAAATGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCC
GGAACTCTTGGCCCCGCACGGAATCAAGTTCGGTGAGGACGTATGGTTCA
AGGCGGAGGCCCACATCTTCGGCGAGGGTCGGCTTGACTACTTGGGAAAC
CCAGCCTGATTCCACGCCCAAAGCATCATGGAACACTGGGCTTGCCGATG
GATCTAGATGGGAGCCGATGAAGGGTACAGAATTGCTGGGAAGGCCCCTC
GGTGAATTGGCTGACCCCATTGAACCCAGATGCCAACTTTTAATCCTTTG
GGTTAGGCTGATAACCCCGAAGGCTATTGACGAACTCAAGGTTAAAGGAA
AACCAAAAATGGAAGGGTGGCATAAGTACTCCTAATTTGGGTTTCATCCT
TTACGGACATTAGCCCTCCCGGACAGGGAACCTATAAAGAAATTTGGCCC
AACCACTTAGGCGAAAACCGGCAAAAAAAAATGACCGGGAGCACAAACCC
CACACACATTATTCCCCCAGGAAAGAGAACCTCTCCTAAAGAAGAAAATA
AAAACCA
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