EY684357

Overview
NameEY684357
Unique NameEY684357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.486e-15
Identity = 51/174 (29.31%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   33 PRVRADVQQENNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNYIYDFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWSPPRQ-QCEVYAFCGQFSTCN*PTERFLFLFERVFNKNPVNDWNL 545
            P ++        +++ LTSW++ ++P+ G FS +L      ++  L+       RSGPW  N   FS +PE   L+Y+  +++  N  E  +T+ + +++  SR  +  SG  +++ W P++  W +FWS P   QC+VY  CG +S C+  T       +R F+ + V +W L
Sbjct:  167 PEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEF-YLFKDDFLVHRSGPW--NGVGFSGMPEDQKLSYMV-YNFTQNSEEVAYTFLMTNNSIYSRLTISSSGYFERLTWTPSSGMWNVFWSSPEDFQCDVYKICGAYSYCDVNTSPVCNCIQR-FDPSNVQEWGL 335          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.539e-15
Identity = 39/148 (26.35%), Postives = 85/148 (57.43%), Query Frame = 3
Query:   33 PRVRADVQQENNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYDFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWSPPRQQCEVYAFCGQFSTCN 473
            P ++     +  +++ LTSW++ ++P+ G +S +L      ++  L + S +  RSGPW+   +I  +  +  L+Y+  +++  N  E+ +T+ + ++++ SR  +  +G  +++ W P++  W +FWS P  QC++Y  CG +S C+
Sbjct:  168 PEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFY-LSSGSFRLHRSGPWN-GFRISGIPEDQKLSYMV-YNFTENSEEAAYTFLMTNNSFYSRLTISSTGYFERLTWAPSSVVWNVFWSSPNHQCDMYRMCGPYSYCD 312          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.045e-13
Identity = 45/173 (26.01%), Postives = 87/173 (50.29%), Query Frame = 3
Query:   33 PRVRADVQQENNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNYIYDFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSPP-RQQCEVYAFCGQFSTCN*PTERFLFLFERVFNKNPVNDWN 542
            P ++     +  +++ LTSW++ ++P+ G FS +L      ++ +       + RSGPW  N   FS +PE   L+Y+  ++++ N  E  +T+ + ++++ SR  +   G  +++ W P+   W  FWS P   QC+ Y  CG ++ C+  T       +  FN   +  W+
Sbjct:  167 PEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMH-RSGPW--NGIRFSGIPEDQKLSYMV-YNFIENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQG-FNPRNIQQWD 334          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.045e-13
Identity = 47/173 (27.17%), Postives = 85/173 (49.13%), Query Frame = 3
Query:   33 PRVRADVQQENNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPE-MTLNYIYDFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSPP-RQQCEVYAFCGQFSTCN*PTERFLFLFERVFNKNPVNDWN 542
            P ++     +  +++ LTSW++ ++P+ G FS +L      ++  LW+      RSGPW  N   FS +PE   L+Y+  +++  N  E  +T+ + +++  SR  +   G  +++ W P+   W  FWS P   QC+ Y  CG ++ C   T       +  FN   +  W+
Sbjct:  168 PEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEF-YLWHGIFPMHRSGPW--NGVRFSGIPEDQKLSYMV-YNFTENSEEVAYTFRMTNNSIYSRLTLSSEGYFQRLTWNPSIGIWNRFWSSPVDPQCDTYIMCGPYAYCGVNTSPVCNCIQG-FNPRNIQQWD 335          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.360e-12
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 3
Query:   75 QLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYDFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSPPRQQCEVYAFCGQFSTCN 473
            ++LTSWK+  +P+ G +S  L  +G      L N   + +R+GPW  N   F+ +P+M      D S++ N  E  +++ V ++    +RF M  +G ++ + W  T     +FWS P   C++Y  CG ++ C+
Sbjct:  186 KILTSWKSPTDPSSGDYSFILETEGFLHEFYLLNNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDNSFIDNNKEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCGPYAYCD 318          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.486e-12
Identity = 40/135 (29.63%), Postives = 70/135 (51.85%), Query Frame = 3
Query:   75 QLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYDFSYVSNENESYFTYSVKDS-TYTSRFIMDVSGQVKQMNWLPT-NSWFLFWSPPRQQCEVYAFCGQFSTCN 473
            ++LTSWK+  +P+ G FS  L  +G      L     + +R+GPW  N   F+ +P+M      D S++ N  E  +++ V ++    +RF M  +G ++ + W  T     +FWS P   C++Y  CG ++ C+
Sbjct:  186 KILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYRTGPW--NGVRFNGIPKMQNWSYIDNSFIDNNEEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCGPYAYCD 318          
BLAST of EY684357 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.852e-11
Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 3
Query:   33 PRVRADVQQENNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGPWDDNAKIFSLVPEMTLNYIYDFSYVSNENESYFTYSVKDSTYTSRFIMDVSGQVKQMNWLPTNS-WFLFWS-PPRQQCEVYAFCGQFSTCN*PTERFLFLFERVFNKNPVNDWN 542
            P ++     +  +++ LTS ++ ++P+ G FS +L P    ++ +       Y RSGPW+   +   L  +  L+Y+    Y+S +    + + + ++++ SR  +  SG ++Q  W P++  W  FW+ P   QC  Y  CG +S C   T       +  FN + V  W+
Sbjct:  165 PEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEFYLSSGVFLLY-RSGPWN-GIRFSGLPDDQKLSYLV---YISQDMRVAYKFRMTNNSFYSRLFVSFSGYIEQQTWNPSSQMWNSFWAFPLDSQCYTYRACGPYSYCVVNTSAICNCIQG-FNPSNVQQWD 330          
The following BLAST results are available for this feature:
BLAST of EY684357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SLSG2_BRAOA2.486e-1529.31S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG3_BRAOL5.539e-1526.35S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SRK6_BRAOE1.045e-1326.01Putative serine/threonine-protein kinase receptor ... [more]
SLSG6_BRAOL1.045e-1327.17S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG1_BRAOA3.360e-1229.63S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
SLSG0_BRAOA7.486e-1229.63S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG4_BRAOL4.852e-1125.58S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-B02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684357 ID=EY684357; Name=EY684357; organism=Citrus sinensis; type=EST; length=966bp
GTCCGGGGTCCCGGAATTTCCCCGGGGTCGACCCCCGCGTCCGAGCTGAC
GTTCAACAAGAGAACAACGTCAGTCAACTTCTCACTTCATGGAAGAATAA
AGAAAATCCTGCACCGGGTCTCTTCTCCCTTGAGCTAGCACCAGATGGAT
CAAATCAATATGTTATTTTGTGGAATAGGTCTGAGCAGTACTGGAGAAGT
GGACCTTGGGATGATAATGCAAAAATTTTCAGCTTGGTCCCTGAAATGAC
ACTAAATTATATCTACGATTTCAGCTATGTGTCGAATGAAAACGAGAGCT
ATTTCACCTACAGTGTGAAAGATAGCACTTACACATCTCGATTCATTATG
GATGTTTCAGGACAGGTTAAGCAGATGAATTGGTTGCCTACCAACTCTTG
GTTTCTGTTTTGGTCCCCACCAAGACAGCAATGTGAGGTTTATGCTTTTT
GTGGTCAATTTAGCACCTGCAATTGACCAACTGAGCGTTTTTTGTTCTTG
TTTGAAAGGGTTTTCAACAAAAATCCGGTGAATGACTGGAATTTGGAAGA
ATTTTTCTGGTGGTTGTGTGAGGGAAAAACCCCCGCTGCAGTGGTGAAAA
ATAATAGCCTTGCCCAATGGAAAAAGCGACCATTTTTTCCAGTCCTTTAA
ACATAATTTGGCCCTAAACTCCACAAACCGGGGGGCGTAAGGGGGGAATC
CGGGAAAGGTTGAAACCCCTGGCTTTGAATAAACTGGCTCTTGGCCTGGG
TAATCGCCTAACAAAAAACAACCCATTGCTCCAATTTGGGATAAGAAATT
TTCCGGGGGGCTTGCCCAACGCCAATCAAGGGGGGGGGGAAGAAAACCCT
TTTACCCCCAAGGCCTGGGCCGCTTCTCGGAATTACCAAGGAGCCCCCCA
AAAAAACCGAAGGGGAGGGAATACCAATTGGGGCCGGGGGTTTTGTGGGG
GTCCACGGAGGCGTGG
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