EY684352

Overview
NameEY684352
Unique NameEY684352
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 8.244e-81
Identity = 153/212 (72.17%), Postives = 179/212 (84.43%), Query Frame = 2
Query:   20 MASHSALAPSRIPAITRIPSKTTHSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQESY*TLAPTK 655
            MA+H+ALA +RIP  TR PSKT+HSFP+QC++KRL+V EF+GL++ +  +Y   ARD+SF+D V AQLT K A GS  VK  TVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+VVNDSGGVKNASHLLKYDS+LGTFKA+VKI++NETI+VDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGP   K I  G ++   T AP K
Sbjct:    1 MATHAALASTRIPTNTRFPSKTSHSFPSQCASKRLEVGEFSGLKSTSCISYVHSARDSSFYDVVAAQLTSK-ANGSTAVKGVTVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT-APAK 210          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.555e-79
Identity = 156/213 (73.24%), Postives = 174/213 (81.69%), Query Frame = 2
Query:   20 MASHSALAPSRIPAITRIPSKTT-HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQESY*TLAPTK 655
            MA+H+ALA SRIP   R+ SK+  HSFP QCS+KRL+VAEF+GLR ++         +ASFFDAV AQ+ PK    S PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VVV+NDSGGVKNASHLLKYDS+LGTFKA+VKIVDNETISVDGKLIKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGP   K I  G  +   T AP K
Sbjct:    1 MATHAALAVSRIPVTQRLQSKSAIHSFPAQCSSKRLEVAEFSGLRMSSIGG------EASFFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVIIT-APAK 206          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.031e-79
Identity = 156/214 (72.90%), Postives = 177/214 (82.71%), Query Frame = 2
Query:   20 MASHSALAPSRIPAITRIPSKTT--HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQESY*TLAPTK 655
            MASH+ALAPSRIPA TR+ SK +  +SF TQCS KRLDVA+F+GLR++   T+    R+ASF D + AQLT K   G+ PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK+A+HLLKYDS+LGTFKADVKI+DNET S+DGK IKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGP   K I  G ++   T AP K
Sbjct:    1 MASHAALAPSRIPASTRLASKASQQYSFLTQCSFKRLDVADFSGLRSSNSVTFT---REASFHDVIAAQLTTK-PTGAAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT-APAK 209          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.723e-70
Identity = 139/183 (75.96%), Postives = 155/183 (84.70%), Query Frame = 2
Query:  107 CSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQESY*TLAPTK 655
            C +K+ +VAEFAGLR++   T++   +++SFFD V+AQLTPK    S PVK ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDS+LGTFKADVKIVDNETISVDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGP   K I  G ++   T AP K
Sbjct:    1 CLSKKFEVAEFAGLRSSGCVTFSN--KESSFFDVVSAQLTPKTTR-STPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT-APAK 179          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.569e-47
Identity = 101/168 (60.12%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  128 VAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQE 628
            ++EF+GLR++A       A    F  AV+ + T  V     P +  T AKLKVAINGFGRIGRNFLRCWHGR D SPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V +  ISVDGK+IKVVS+R+P  LPW ELGID+VIEGTGVFVD     K I  G ++
Sbjct:   19 LSEFSGLRSSASLPMRRNATSDDFMSAVSFR-THAVGTSGGPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKK 185          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 5.048e-46
Identity = 96/165 (58.18%), Postives = 116/165 (70.30%), Query Frame = 2
Query:  134 EFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQE 628
            EF+GLR+++ +        +  F ++ +  T  + +     K  T AKLKVAINGFGRIGRNFLRCWHGRKDSPLD++ +ND+GGVK ASHLLKYDS LG F ADVK      ISVDGK+I+VVSNR+P  LPW ELGIDIVIEGTGVFVD     K I  G ++
Sbjct:   14 EFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKK 178          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.593e-46
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 2
Query:  131 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQE 628
            +EF+GLR ++   +     D     +V A  T  +  G+   K+  V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V  + ISVDGK+I+VVS+R+P+ LPW +LGID+VIEGTGVFVD     K I  G ++
Sbjct:   12 SEFSGLRTSSAIPFGRKTNDDLL--SVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKK 174          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 8.611e-46
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2
Query:  131 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQE 628
            +EF+GL  ++      G+ D   F  V+ Q T  V            AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVV+ND+GGVK ASHLLKYDS+LGTF ADVK   +  ISVDGK+IKVVS+R+P+ LPW ++GID+VIEGTGVFVD     K +  G ++
Sbjct:   21 SEFSGLHTSSLPFGRKGSDDLMAF--VSFQ-TNAVGGKRSSQNGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKK 183          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 5.581e-45
Identity = 97/167 (58.08%), Postives = 115/167 (68.86%), Query Frame = 2
Query:  131 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAK-LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQE 628
            +EF+GLR ++     +      F   VT Q     ++G         AK LKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V  + ISVDGK+IKVVS+R+P  LPW ELGID+VIEGTGVFVD     + I  G ++
Sbjct:   21 SEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKK 187          
BLAST of EY684352 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44
Identity = 94/142 (66.20%), Postives = 108/142 (76.06%), Query Frame = 2
Query:  230 KVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPWCWKPIPPGCQESY*TLAPTK 655
            K A   V V+ E   K++VAINGFGRIGRNFLRCWHGR+++ LDVV +NDSGGVK ASHLLKYDS LGTF ADVKIVD+  ISVDGK IK+VS+RDPLQLPW E+ ID+VIEGTGVF+D     K I  G  +   T AP K
Sbjct:   24 KAARAVVDVRAEK--KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLIT-APAK 162          
The following BLAST results are available for this feature:
BLAST of EY684352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
G3PB_PEA8.244e-8172.17Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_ARATH1.555e-7973.24Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_SPIOL2.031e-7972.90Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_TOBAC1.723e-7075.96Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PA_MAIZE1.569e-4760.12Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH5.048e-4658.18Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC6.593e-4658.68Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL8.611e-4659.04Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_PEA5.581e-4558.08Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_CHLRE1.624e-4466.20Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-A09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684352 ID=EY684352; Name=EY684352; organism=Citrus sinensis; type=EST; length=858bp
AGCAACTAAGCCACAGGCCATGGCCAGTCACTCAGCTCTTGCTCCCTCAA
GAATCCCGGCCATCACTAGGATTCCATCCAAGACTACTCACTCTTTTCCC
ACTCAATGCTCCACCAAGAGGCTGGATGTGGCTGAATTCGCTGGCCTTCG
AGCAAATGCAGGCGCGACATACGCCACTGGTGCTAGAGATGCATCCTTCT
TTGATGCTGTGACTGCTCAACTTACTCCTAAGGTTGCAGCAGGATCAGTT
CCTGTAAAGAAAGAAACCGTGGCCAAATTGAAGGTGGCAATTAATGGATT
TGGACGTATTGGCAGGAACTTCCTCCGATGCTGGCACGGCAGGAAAGACT
CACCCCTTGATGTTGTTGTTGTCAATGACAGTGGTGGTGTCAAGAATGCT
TCACACCTTCTAAAATATGACTCATTGCTTGGAACTTTTAAAGCAGACGT
GAAAATAGTGGACAACGAGACCATCTCTGTCGATGGTAAGCTCATCAAGG
TTGTCTCTAACAGGGACCCTCTCCAGCTCCCTTGGGCTGAGCTCGGAATT
GACATCGTTATTGAGGGAACAGGAGTTTTTGTGGACGGCCCCTGGTGCTG
GAAGCCCATCCCACCTGGGTGCCAAGAAAGTTATTAAACCCTGGCTCCCA
CCAAAAGGTGGCAAAATTCCAACCTATGTCCTTGGAGTTTAACGAAAAGG
ATTACCAACCCCAAGGTTGCAAAACTTTGTGAGGGGCGGGGTATTCCTGG
CAGGTTAAATAAAAAGGGCAACCCCCTTTTCCCTTTTTCTAAACCTTGGT
AACCCAATTTGGGCGTCCCCCCAACAAAGGGCTTTCCTGGCCCCCCAAAA
AATGGGTT
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