EY684349

Overview
NameEY684349
Unique NameEY684349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.077e-21
Identity = 33/94 (35.11%), Postives = 45/94 (47.87%), Query Frame = 1
Query:  304 TFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            T   G+LSAF+P Y                     + + EF+P  +R K +++   FW  G+V E  LA  VMP L WRWL  LSA+P  +  I
Sbjct:  160 TLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKSRAKCILLIEIFWALGTVFEVLLAIFVMPTLGWRWLLILSALPLMLFAI 253          

HSP 2 Score: 61.2326 bits (147), Expect = 2.077e-21
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG +SD YGRR
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMASSSLWGNVSDQYGRR 150          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 67.3958 bits (163), Expect = 4.577e-21
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFIT 215
            +G+ W ++AME+M+LS + PA+  EWG        +TT VF+GM++ +  WG I D +GRRK   F T
Sbjct:   89 TGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFST 156          

HSP 2 Score: 54.299 bits (129), Expect = 4.577e-21
Identity = 29/104 (27.88%), Postives = 48/104 (46.15%), Query Frame = 1
Query:  274 RMSILGGALVTFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            R  +    LV  + G++S  SP++                     + + EF+P + R K +V+  +FW  G+V EA LA+ VM    WR L  LS++P  +  +
Sbjct:  149 RKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGWRALMFLSSLPLGIFAV 252          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.947e-21
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 1
Query:  298 LVTFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            L T   G+LSAF+P Y                     + + EF+P   R K +++   FW  G+V E  LA  VMP L WRWL  LSA+P  +  +
Sbjct:  158 LWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAV 253          

HSP 2 Score: 60.077 bits (144), Expect = 5.947e-21
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.947e-21
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 1
Query:  298 LVTFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            L T   G+LSAF+P Y                     + + EF+P   R K +++   FW  G+V E  LA  VMP L WRWL  LSA+P  +  +
Sbjct:  158 LWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAV 253          

HSP 2 Score: 60.077 bits (144), Expect = 5.947e-21
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.947e-21
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 1
Query:  298 LVTFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            L T   G+LSAF+P Y                     + + EF+P   R K +++   FW  G+V E  LA  VMP L WRWL  LSA+P  +  +
Sbjct:  158 LWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAV 253          

HSP 2 Score: 60.077 bits (144), Expect = 5.947e-21
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.702e-20
Identity = 33/94 (35.11%), Postives = 43/94 (45.74%), Query Frame = 1
Query:  304 TFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            T   G+LSAF+P Y                     + + EF+P   R K +++   FW  G+V E  LA  VMP L WRWL  LSA P  V  +
Sbjct:  160 TLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLLLLSAAPLLVFAV 253          

HSP 2 Score: 59.6918 bits (143), Expect = 1.702e-20
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.880e-20
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query:   12 SGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 194
            +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   90 TGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRK 150          

HSP 2 Score: 59.3066 bits (142), Expect = 2.880e-20
Identity = 33/96 (34.38%), Postives = 44/96 (45.83%), Query Frame = 1
Query:  298 LVTFVAGLLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLI 585
            L T   G+LSAF+P Y                     + + EF+P   R K +++   FW  G+V E  LA  VMP L WRWL  LSA P  +  +
Sbjct:  158 LWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLLLLSAAPLLLFAV 253          
BLAST of EY684349 vs. ExPASy Swiss-Prot
Match: SVOPL_HUMAN (Putative transporter SVOPL OS=Homo sapiens GN=SVOPL PE=2 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 6.555e-15
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 3
Query:   33 EAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKV 200
            EAME+M+++ V P ++ EW         +TT+VF G +V +  +GL++D YGR K+
Sbjct:   61 EAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKI 116          

HSP 2 Score: 50.0618 bits (118), Expect = 6.555e-15
Identity = 32/118 (27.12%), Postives = 55/118 (46.61%), Query Frame = 1
Query:  268 FSRMSILGGALVTFVAG----LLSAFSPNYXXXXXXXXXXXXXXXXXHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLPALSAIPAFVLLIFNGFHAQS 609
            + R  IL   L++F+ G    LL++F+P+Y                         EF+P   RG  + +   FW  GS+    LA +++P + WRWL  +++IP  +L++   F  +S
Sbjct:  111 YGRWKIL---LISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPES 225          
The following BLAST results are available for this feature:
BLAST of EY684349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SVOP_XENLA2.077e-2135.11Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
YOU1_CAEEL4.577e-2142.65Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
SVOP_PONAB5.947e-2134.38Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN5.947e-2134.38Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN5.947e-2134.38Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
SVOP_RAT1.702e-2035.11Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOP_MOUSE2.880e-2044.26Synaptic vesicle 2-related protein OS=Mus musculus... [more]
SVOPL_HUMAN6.555e-1539.29Putative transporter SVOPL OS=Homo sapiens GN=SVOP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684349 ID=EY684349; Name=EY684349; organism=Citrus sinensis; type=EST; length=886bp
CGCTTGCTTATTCTGGGCTCGGTTGGTTTTCAGAAGCAATGGAGGTTATG
ATTCTCTCCTTTGTGGGACCTGCAGTGAAGTCTGAGTGGGGATTGTCCTC
AAGTGAAGAGAGCCTTATAACAACTGTTGTTTTTGCTGGAATGTTAGTTG
GAGCATATTCATGGGGCCTTATATCCGACATATATGGAAGAAGGAAGGTT
TTCTTCTTTATTACATCCTGATATGTGCCCCAAATTGCTCCTTGAACCAT
TGTATTTTATTTTTGCATTTTCCAGGATGAGTATCCTTGGTGGAGCTTTA
GTGACTTTTGTAGCTGGGTTATTAAGTGCTTTCTCCCCTAACTACATATC
ATTGTTGATTCTTCGTGGTTTGGCTGGCGCTGGCCTGGGCAGTGGGCATG
TCTTCTTCTCCTGGTTTATGGAGTTTGTTCCTCCTTCAAATCGAGGAAAG
TGGATGGTCGTCTTTTCAACTTTCTGGACATTTGGGTCGGTTTCTGAGGC
TGCACTTGCTTGGATCGTCATGCCAATATTGACTTGGAGGTGGCTACCTG
CTTTGTCTGCAATACCTGCATTTGTTCTGCTTATTTTTAATGGTTTTCAT
GCCCAAAGTCTCCAGAATATCTATTGTACAAAAAGTAAAATAAACGGATG
GCCCTAAAATTCCTGAATAAAAAAAGCTCAATTTCAACCAAACAAAGCCT
CCCTTTTGGGAAACCTTAATTTCTGAAGGAAAAAAAGGATTTTGGAAGAA
AAATTTTTCTAACTCAAAAAAAAAACTCCCCCTTCCTTCTTTTACCTCTA
AAAAAAGGGCCCCCCGTCCCCCCAAACAAGGGGTTTCCCCTCCTTTTTTA
ATGGTTTTTTTTCCCCCCAAAAATTTTTTTTTAAAA
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