EY684341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 5.730e-90 Identity = 171/240 (71.25%), Postives = 188/240 (78.33%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQNF*GS*RCCKKCNMGI-------LRHEYLFGSVGEDQ*PA**GIYEHTHG------TNSSQSVALTQRKGNWPTFSPPLMKGILATG 693 GTHTSENEPNYLMLAQVQLPL+D+ENDARHYDDDRS+FGGFGCANGKVQIIQQINHDGEVNRARYMPQNPF+IATKTVSAEVYVFDYSKHPSKPPLDGAC+PDLRLRGHSTEGYGLSWS+FK+GHLLSGSDD+ ICLWDINA PKNK+LEAMQ F K + G+ LRHEYLFGSVG+DQ Y H T QSV Q + N F+ P + ++ATG Sbjct: 69 GTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIF--------KVHEGVVEDVAWHLRHEYLFGSVGDDQ-------YLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFN-PFNEWVVATG 292
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 3.843e-86 Identity = 153/190 (80.53%), Postives = 168/190 (88.42%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQNF*GS*RCCKKCNMGI-------LRHEYLFGSVGEDQ 561 GTHTSE+EPNYLMLAQVQLPLDD+E++AR YDDDRS+FGGFGCA GKVQIIQQINHDGEVNRARYMPQNPF+IATKTV+AEVYVFDYSKHPSKPPLDGAC+PDL+LRGHS+EGYGLSWSKFK+GHLLSGSDDAQICLWDINA PKNKSL+A Q F K + G+ LRHEYLFGSVG+DQ Sbjct: 69 GTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIF--------KAHEGVVEDVAWHLRHEYLFGSVGDDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 7.069e-56 Identity = 109/184 (59.24%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4) HSP 1 Score: 217.624 bits (553), Expect = 7.069e-56 Identity = 109/184 (59.24%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP-KNKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A P K K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_HUMAN (Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 7.069e-56 Identity = 109/184 (59.24%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_CHICK (Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 7.069e-56 Identity = 109/184 (59.24%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 7.069e-56 Identity = 109/184 (59.24%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.233e-56 Identity = 122/230 (53.04%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ*PA**GIYEHTHGTNS--SQSVALTQRKGNWPTFSPPLMKGILATG 693 GTHTS+ E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYMPQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHLLS SDD +CLWDI+A PK K ++A F G + +L HE LFGSV +DQ I++ T S S SV + N +F+ P + ILATG Sbjct: 68 GTHTSD-EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLL-HESLFGSVADDQKLM---IWDTRSNTTSKPSHSVDAHTAEVNCLSFN-PYSEFILATG 291
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.233e-56 Identity = 122/230 (53.04%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ*PA**GIYEHTHGTNS--SQSVALTQRKGNWPTFSPPLMKGILATG 693 GTHTS+ E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYMPQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHLLS SDD +CLWDI+A PK K ++A F G + +L HE LFGSV +DQ I++ T S S SV + N +F+ P + ILATG Sbjct: 68 GTHTSD-EQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLL-HESLFGSVADDQKLM---IWDTRSNTTSKPSHSVDAHTAEVNCLSFN-PYSEFILATG 291
BLAST of EY684341 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 4.582e-55 Identity = 108/184 (58.70%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 13 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQNF*GS*RCCKKCNMGILRHEYLFGSVGEDQ 561 GTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+LLS SDD ICLWDI+A PK K ++A F G + + +L HE LFGSV +DQ Sbjct: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLL-HESLFGSVADDQ 250 The following BLAST results are available for this feature:
BLAST of EY684341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684341 ID=EY684341; Name=EY684341; organism=Citrus sinensis; type=EST; length=860bpback to top |