EY684335

Overview
NameEY684335
Unique NameEY684335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.088e-78
Identity = 138/192 (71.88%), Postives = 168/192 (87.50%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSRINRFGSPGSSLNIG**NRIIQAP 577
            P+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+Y+Y+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA+GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TG P E++ KDLSR+ RF +   ++  G  ++I++ P
Sbjct:   73 PRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE-EAIEYGLIDKIVRPP 263          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.306e-49
Identity = 102/194 (52.58%), Postives = 132/194 (68.04%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSRINRFGSPGSSLNIG**NRIIQAPSN 583
            PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D  K + LYIN PGG VT  +AIYDTMQ +KS V T CVG A  +  FLLA+G KG R A+P SRI ++ P+G  RGQA DI  EA E+LRVR  + +  +  TG P EKI +D+ R + F S   + N G  +R+I+  SN
Sbjct:    6 PKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDR-DFFMSAEEAKNYGLIDRVIEERSN 198          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.071e-46
Identity = 95/190 (50.00%), Postives = 127/190 (66.84%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSRINRFGSPGSSLNIG**NRIIQ 571
            PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA+G KG R A+P SRI ++ P+G  RGQA DI  EA E+LR+R  + +  +  T  P  KI KD+ R + F S   ++  G  +R+I+
Sbjct:    6 PKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDR-DFFMSAQEAMEYGLIDRVIE 194          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.547e-45
Identity = 95/190 (50.00%), Postives = 126/190 (66.32%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSRINRFGSPGSSLNIG**NRIIQ 571
            PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA+G KG R A+P SRI ++ P+G  RGQA DI  EA E+LR+R  + +  +  T  P  KI KD+ R + F S   +   G  +R+I+
Sbjct:    6 PKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDR-DFFMSAQEAKEYGLIDRVIE 194          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.710e-44
Identity = 83/169 (49.11%), Postives = 124/169 (73.37%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSR 508
            PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+YIN PGG VT  +A+YDTM  +K+ V T CVG A  +A F+LA G +G R A+P SRI ++ P G +RGQA ++ +E++E++R+R  + K  +++TG P  +I++DL R
Sbjct:    6 PKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDR 174          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.385e-43
Identity = 84/169 (49.70%), Postives = 118/169 (69.82%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSR 508
            PKV YR PG G  QW+D++N L  +R+IF+G+ +D+E +N I+A+MLYLDS D  K ++LYIN PGG V+  LAIYDTMQ +++ V T CVG A  +  FLL +G KG R+++P SRI ++ P G A+GQA DI  +A E+L  +D + + LS +TG P E+I +D  R
Sbjct:    6 PKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDR 173          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.731e-42
Identity = 78/169 (46.15%), Postives = 120/169 (71.01%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSR 508
            PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++  MLYL++ + +K +Y+YIN PGG VT  +A+YD M  +KS V T CVG A  +A F+LA G++G R A+P SRI ++ P G ++GQA ++ +E+ E++R+R  + +  S +TG    ++++D+ R
Sbjct:    6 PKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERTGQTLSRVSRDMDR 174          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.083e-42
Identity = 85/170 (50.00%), Postives = 113/170 (66.47%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSR 508
            P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +YLYIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL +G KG R A+P SRI ++ P  G  R QA DI  EA E+LR++  + + ++ +TG P EKI KD  R
Sbjct:    6 PSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDR 175          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.083e-42
Identity = 85/170 (50.00%), Postives = 113/170 (66.47%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSR 508
            P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +YLYIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL +G KG R A+P SRI ++ P  G  R QA DI  EA E+LR++  + + ++ +TG P EKI KD  R
Sbjct:    6 PSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDR 175          
BLAST of EY684335 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.945e-42
Identity = 91/194 (46.91%), Postives = 126/194 (64.95%), Query Frame = 2
Query:    2 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLASGEKGNRSAMPLSRIALNSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGHPFEKITKDLSRINRFGSPGSSLNIG**NRIIQAPS 580
            P V YR PG    +WVD++  L  ER++F+GQ +++  +N ++A MLYLDS D SK +YLYIN PGG VT  LAIYDTM+ +KS + T CVG A  +  FLL++G KG R A+P SRI ++ P  G A+ QA DI  EA E+LR+++ + K ++  TG  +EKI KD  R + F S   + N G  +R+I  PS
Sbjct:    6 PSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDR-DYFLSAEEAKNYGLIDRVITHPS 198          
The following BLAST results are available for this feature:
BLAST of EY684335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH3.088e-7871.88ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB2.306e-4952.58ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANASP4.071e-4650.00Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP2_ANAVT1.547e-4550.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_OLTVI1.710e-4449.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_GLOVI9.385e-4349.70ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_CHLVU2.731e-4246.15ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNE76.083e-4250.00ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP66.083e-4250.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_PROMT7.945e-4246.91ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684335 ID=EY684335; Name=EY684335; organism=Citrus sinensis; type=EST; length=884bp
ACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTG
ATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAAT
ATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGA
CAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTG
GGGATGTTACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAG
AGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTT
TCTTCTAGCAAGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGA
GAATTGCTTTAAACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGAC
ATTCGTAATGAAGCAGATGAGCTTCTTAGAGTCAGAGATTACATTTTCAA
GGAGTTGTCTAGGAAAACGGGTCACCCCTTTGAGAAGATTACAAAGGATT
TAAGTAGGATTAACCGCTTTGGTTCCCCAGGAAGCTCTTTGAATATTGGC
TGATAGAATCGTATAATTCAGGCACCCTCGAATTAGGGAAGAATTGGCCT
TCGTAAAAATGCAGGAAACCAGGTCTTGGGTAAGGGAATTCTTTGATTCT
CCCCGGGAAAAAACCGGGAATCCAACCAATTTTTTTACCTTTTGCGAATT
TCCTTTCCTCCACTTGGGAAAATTAAAATACTTAAACCAAAATTTCTTTT
GAAAAAATTTTTGGCCCCGAAAAGGTGGTAATTTACAGTTCAAAAAAACC
CTAAAAAAAAATTTAGAAGGGGTGCCGGGTTTTGGGAAGGGTTTTTATCA
AAAAGACATATATTAAACTCAATGATGTAAAATT
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