EY684334

Overview
NameEY684334
Unique NameEY684334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 5.461e-41
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGLTF+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 5.461e-41
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 22.3274 bits (46), Expect = 5.461e-41
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.200e-40
Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 24.2534 bits (51), Expect = 1.200e-40
Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATENI 507
            RMLN+ +LR    L  A  +DLP+A  A E I
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAEII 140

HSP 3 Score: 22.3274 bits (46), Expect = 1.200e-40
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.561e-40
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGLTF+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 1.561e-40
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 20.7866 bits (42), Expect = 1.561e-40
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DR+R+V  RDEL +
Sbjct:   96 DRERVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 1.561e-40
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGLTF+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 1.561e-40
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 20.7866 bits (42), Expect = 1.561e-40
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DR+R+V  RDEL +
Sbjct:   96 DRERVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 1.561e-40
Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 1.561e-40
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 22.3274 bits (46), Expect = 1.561e-40
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 1.561e-40
Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F+KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 1.561e-40
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 22.3274 bits (46), Expect = 1.561e-40
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.029e-40
Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F KLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 2.029e-40
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 22.3274 bits (46), Expect = 2.029e-40
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.066e-39
Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGLT SKLFSRLFA KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLTISKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 3.640e-39
Identity = 80/93 (86.02%), Postives = 86/93 (92.47%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F+KLFSRLFA KEMRI MVGLDAAGKTTIL +LKLGEIVTTIPTIGFNVETV+Y+ ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 3.640e-39
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

HSP 3 Score: 22.3274 bits (46), Expect = 3.640e-39
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 
Query:  372 DRDRIV*TRDELDK 413
            DRDR+V  RDEL +
Sbjct:   96 DRDRVVEARDELHR 109
[Close]
BLAST of EY684334 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 1.627e-38
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 2 
Query:   86 MGLTFSKLFSRLFAYKEMRIPMVGLDAAGKTTIL*KLKLGEIVTTIPTIGFNVETVDYKDISFTVWDVGGQDKIRPLRRHYFQKPRGLIFVVD 364
            MGL+F+KL  RLF+ KEMRI MVGLDAAGKTTIL KLKLGEIVTTIPTIGFNVETV+YK+ISFTVWDVGGQDKIRPL RHYFQ  +GLIFVVD
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93

HSP 2 Score: 23.8682 bits (50), Expect = 1.627e-38
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 
Query:  412 RMLNDVDLRTDRCLDMAI*RDLPHAAMATE 501
            RMLN+ +LR    L  A  +DLP+A  A E
Sbjct:  109 RMLNEDELRDAVLLVFANKQDLPNAMNAAE 138
The following BLAST results are available for this feature:
BLAST of EY684334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
ARF_MAIZE5.461e-4189.25ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF1_DAUCA1.200e-4088.17ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF2_ORYSJ1.561e-4089.25ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ1.561e-4089.25ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF_VIGUN1.561e-4088.17ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ARATH1.561e-4088.17ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_ARATH2.029e-4088.17ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_SOLTU2.066e-3989.25ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF1_CATRO3.640e-3986.02ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF1_SALBA1.627e-3884.95ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-H02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684334 ID=EY684334; Name=EY684334; organism=Citrus sinensis; type=EST; length=860bp
AGCTAATAAGCTTCGTCCTCCACACCCCCCCCCCCTCCCCTCTCTCTCTC
GCGTTCTCTGAAGATAGTGATCCCCAGCTGGAAGAATGGGGCTGACTTTC
TCAAAGCTGTTCAGCCGGCTCTTTGCCTACAAAGAGATGCGAATTCCAAT
GGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTAAAAACTCAAGC
TTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTAATGTGGAGACC
GTTGATTATAAAGACATCAGTTTCACTGTGTGGGATGTTGGGGGCCAGGA
CAAGATTCGTCCCTTGAGGAGGCATTATTTCCAGAAACCTCGAGGTCTCA
TTTTTGTTGTGGACCGCAGTGGACAGAGACCGTATTGTATAAACAAGGGA
TGAATTGGATAAGGATGTTGAATGATGTTGATCTGCGAACTGACCGTTGC
TTGGATATGGCTATCTAACGTGATCTACCACATGCAGCGATGGCTACTGA
AAATATCTAATAAACTTGAACCCAAACTCCCTCAAGCTAGTACCACTGGG
AAATTCTGAAACCCACGGTCCAGCTCCTGGAGAGAGAGCCATAAAGAAAG
GGCTGAGAATGGCTCCACCCCAAACATCGGTAGAGAGGCGCGAAAAGTAT
TTTGAATTCTTTTTGCGGGAATGGCCCTTTTTGAGTGTACCGGGGGGAAA
TAATACCAAATTTTTTTTCTACATTTTTAACCCCCTTTTGGATTGGAAGA
CAGATTAGGGTACATTGAGCTGCTTTTTGATACTAGCAGAGAATGATACA
GGAGTAATTTATAGGTCGAATAAATTATTAGGCGACCCTGGGATCGATTG
GCCACCCCAG
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