EY684329

Overview
NameEY684329
Unique NameEY684329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: BCHH_RHOCA (Magnesium-chelatase subunit H OS=Rhodobacter capsulatus GN=bchH PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.938e-35
Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = 1
Query:   19 RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKR-KVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFR-KDGKKPNAYIADTTTANAQVRTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVYKK 546
            RVFSNA G+Y SN+N  V ++ + DE +L D Y +RKSFA+  D    G S K+  + +  L   D  +QNL+S E+ +T V HYFD+       + R + GK+   YI D T     VRTL + + L+ R + LNPK+YEG++  G EGVR+IE ++TNT+GWSAT+GQV  WVY++
Sbjct:  955 RVFSNAEGAYGSNVNTLVGSAGFGDEDELADAYEARKSFAYGRD----GKSTKQVNLLQNVLSKVDLAYQNLESVELGVTTVDHYFDTLGGIARATKRAQGGKETPVYIGDQTRGAGTVRTLQDQIALETRARSLNPKFYEGLLKHGAEGVRQIEAQVTNTLGWSATTGQVEPWVYQR 1128          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: BCHH_RHOS4 (Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.531e-35
Identity = 75/176 (42.61%), Postives = 111/176 (63.07%), Query Frame = 1
Query:   19 RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFRKDGKKPNAYIADTTTANAQVRTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVYKK 546
            RVFSNA G+Y SN+N+ V +S++ +E +L D Y +RKSFA+          +   + + +L T D  +QNL+S E+ +T V HYFD+         R  G++ + YI D T     VRTL + + L+ R + LNPK+YEG++  G EGVR+IE ++TNT+GWSAT+ QV  WVY++
Sbjct:  955 RVFSNAEGAYGSNVNVLVGSSAFGEEDELADAYEARKSFAYGRSGKPV---QNAALLQKSLKTVDVAYQNLESVELGVTTVDHYFDTLGGIARAVKRARGEEASVYIGDQTRGGGTVRTLKDQIALETRARSLNPKYYEGLLKHGAEGVRQIEAQVTNTLGWSATTQQVEPWVYQR 1127          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: BCHH_CHLP8 (Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchH PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.641e-27
Identity = 58/179 (32.40%), Postives = 106/179 (59.22%), Query Frame = 1
Query:   16 TRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFRKDGKKPNAYI--ADTTTANAQVRTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVYKK 546
            +R F+ A G+Y + ++  +E+S+W +E  L D+++ R S A+     G   SE   + +  LG+ D     +DS+E  ++D+ HYF S  +  + + R++ K  +  +   ++ T++ ++    +++R++ R+KLLNPKW+EGM+  G+ G  EI  R+T  +GW A +  V +WVYKK
Sbjct: 1030 SRQFTQAPGAYGTYVDDMIEDSAWENEGDLDDLFIRRNSSAYGGGRKGEKQSE---ILQKLLGSVDRVVHQVDSTEFGISDIDHYFSSSGSLQLAARRRNTKTSDIKLNYVESFTSDIKLDEADKSLRVEYRSKLLNPKWFEGMLKHGHSGAGEISNRVTYMLGWDAVTKSVDDWVYKK 1205          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: Y1441_METJA (Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii GN=MJ1441 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.976e-24
Identity = 63/177 (35.59%), Postives = 95/177 (53.67%), Query Frame = 1
Query:   19 RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDP--TNLVQSFRKDGKKPNAYIADTTTAN-AQVRTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVY 540
            R+F +  G+Y + +  AV  S+W +++ L+D ++   S+A+  D  G    +    FE  L T D TF  + + E  L     YF +    TN  +  +  G++  AY  DT   N  +VRTL E +   + TKLLNPKW EGM   GY+G  +I KR+    GWSAT+ +V NW++
Sbjct:  960 RIFCSPPGTYGNGVKYAVYASAWENDEDLKDAFIYWNSYAYGKDVYG---KKAINAFENILKTVDLTFNKVVTDEYDLFGCCCYFGTHGGLTNAARVLK--GEEVKAYYGDTRNPNNVEVRTLKEEIERVSLTKLLNPKWIEGMKRHGYKGAGDIAKRIGRVYGWSATTKEVENWIF 1131          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: Y908_METJA (Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii GN=MJ0908 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.395e-17
Identity = 55/179 (30.73%), Postives = 91/179 (50.84%), Query Frame = 1
Query:   19 RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFRK-DGKKPNAYIADTTTANAQVRT--LAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVYKK 546
            R+FS+  G Y + ++  ++  +W   +    +Y+    +A+     G    E ++ F   L   + T +N DS E  + +    F+S    L+ S     GKKP +Y+ DT+  N  +RT  L E  +   RTK++NPKW EGM   GY+G  +  K + +   W ATSG + +W+Y+K
Sbjct:  995 RIFSDKPGCYGAGVSHLIDEKNWESIEDFAKVYVEWGGYAYGKGYYGV---EAKEEFINRLSKIELTVKNEDSQEWDIFEGDD-FNSYHGGLIASVTYYSGKKPVSYVGDTSNPN-DIRTKHLKEEGKEIFRTKIMNPKWIEGMKRHGYKGAADFSKYVDHMFAWDATSGIIDDWMYEK 1168          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: COBN_PSEDE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas denitrificans GN=cobN PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15
Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 1
Query:    7 RPATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFRKDGKKPNAYIADTTTANAQV-RTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQV 525
            R + RVF    G+Y + +   ++   W  +  L + YL+  ++A+     G     +R +FE  L T +A  QN D+ E  L D   Y+  +      + +  G +P  Y  D +     V R+L E +    R +++NPKW +G+M  GY+G  EI   +     ++AT+G V
Sbjct: 1033 RASYRVFGAKPGAYGAALQALIDEKGWETKADLAEAYLTWGAYAYGAGEEGKA---ERDLFEERLRTIEAVVQNQDNREHDLLDSDDYYQFEGGMSAAAEQLGGHRPAIYHNDHSRPEKPVIRSLEEEIGRVVRARVVNPKWIDGVMRHGYKGAFEIAATVDYMFAFAATTGAV 1203          
BLAST of EY684329 vs. ExPASy Swiss-Prot
Match: COBN_PSEAE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas aeruginosa GN=cobN PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 46/175 (26.29%), Postives = 73/175 (41.71%), Query Frame = 1
Query:   19 RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALGTADATFQNLDSSEISLTDVSHYFDSDPTNLVQSFRKDGKKPNAYIADTTTA-NAQVRTLAETVRLDARTKLLNPKWYEGMMSSGYEGVREIEKRLTNTVGWSATSGQVGNWVY 540
            R+F    G+Y + +  A+E   W     L ++YL+   +A+     G    E+   F   L    A   N D+ E  L D + Y+      L       G    +Y  D +   N ++RTL E +    R + +NPKW  GM   GY+G  E+   +     + ATS  + +  Y
Sbjct: 1016 RIFGAKPGAYGAGVQGAIEERLWETRADLAEVYLNWGGYAYGAADDGTPARER---FAQRLERLQAVLHNQDNREHDLLDSNDYYQFQGGMLAAVETLRGAPVASYHGDHSQPDNPRIRTLKEELNRVVRARAVNPKWIAGMKRHGYKGAFELAATVDYLCAFDATSELIDDHQY 1187          
The following BLAST results are available for this feature:
BLAST of EY684329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BCHH_RHOCA1.938e-3544.94Magnesium-chelatase subunit H OS=Rhodobacter capsu... [more]
BCHH_RHOS42.531e-3542.61Magnesium-chelatase subunit H OS=Rhodobacter sphae... [more]
BCHH_CHLP89.641e-2732.40Magnesium-chelatase subunit H OS=Chlorobaculum par... [more]
Y1441_METJA9.976e-2435.59Uncharacterized protein MJ1441 OS=Methanocaldococc... [more]
Y908_METJA1.395e-1730.73Uncharacterized protein MJ0908 OS=Methanocaldococc... [more]
COBN_PSEDE6.482e-1528.16Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
COBN_PSEAE2.549e-1126.29Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-G08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684329 ID=EY684329; Name=EY684329; organism=Citrus sinensis; type=EST; length=894bp
CCCACGCGTCCGGCAACTCGGGTTTTCTCCAATGCCTCGGGATCCTACTC
CTCCAACATAAACCTTGCTGTTGAGAATTCCTCATGGAATGACGAGAAAC
AGCTCCAGGACATGTATTTGAGCAGGAAGTCCTTTGCCTTTGATTGTGAT
GCCCCTGGCGCAGGCATGAGTGAGAAAAGAAAAGTTTTTGAGATGGCTCT
AGGCACAGCAGACGCCACATTCCAAAACCTCGACTCCTCTGAAATCTCCC
TCACTGATGTGAGCCACTACTTCGATTCCGACCCAACAAATTTGGTCCAG
AGCTTCAGGAAGGATGGAAAGAAGCCTAATGCCTACATTGCTGATACTAC
CACAGCTAATGCTCAGGTGCGTACACTTGCTGAGACCGTGAGGCTTGATG
CGCGAACCAAATTGTTGAACCCGAAATGGTATGAAGGAATGATGTCCAGT
GGTTATGAAGGTGTTCGTGAAATTGAGAAACGGCTTACTAACACTGTTGG
GTGGAGTGCAACTTCGGGCCAAGTTGGAAACTGGGTCTACAAAAAACCTA
AACTTCCCTTTACCCAGATGAAGAAAGGTTGAACCGGCTGAAGAATACCA
ATCCAAATTCTTTTAGGGAAGTTGGGGGCAAAAATTTCTGGAGGGCCAAT
GGGCCGTGGAAACCGGGGAAACTTTCGGAGAAAACCTTTTGAAAAATTTG
AAGGCAATTTGTATTTCGAAAAGTTAAAAAAGAAAATTGAGGGGATTGCA
CCGGGGGAATTTATAGTAAAAAACCTGGTTAAAAAAGGGCCCCCCACCGC
GCGAAAATTCAAATTGAACGTGGGTGTTATTTCATTTAAACCCCTTTTTT
TTTTTCCACCTTTTCCCCAGGTAATAATATTTTTGGGGAGGGGG
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