EY684328

Overview
NameEY684328
Unique NameEY684328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684328 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.233e-21
Identity = 72/163 (44.17%), Postives = 93/163 (57.06%), Query Frame = 3 
Query:  147 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAPVIKRWGCLVLGDQCFCSRLRPWFLLFKGVTVEFKSEGFIDFRC*SYRMGKVDMLG 611
            RS  NQ +++   Y+P+LRRNV+L VR  A             PT P A    PQP   + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ +   +        LG     S L      F+GV+VE KS+  +      +  G++ MLG
Sbjct:   20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLS-LASLIPFFQGVSVESKSKSIMSSDA-EFWNGRIAMLG 180
The following BLAST results are available for this feature:
BLAST of EY684328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ELI_PEA1.233e-2144.17Early light-induced protein, chloroplastic OS=Pisu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-G07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684328 ID=EY684328; Name=EY684328; organism=Citrus sinensis; type=EST; length=903bp
CACGCGTCCGCCCGCCGACCTGAAGCACCCAATTCCCGAATTATACTTTG
TTCTGTTTTCTACTTCATAAATTAAAAATGGCCGCATCACTTGCTACTCA
ATCTATGCTGGCAAGTCCTGTAGCAGCTCGTGTGACTGGTATCAGGAGAT
CCGGGGCAAACCAACTTTCCTCCGTCAAGTACTTGCCTAGTCTGCGTAGA
AATGTCAACTTATCCGTGCGCTGCACGGCAGAGGATGAGCAGCAGCAGCA
GCAGAAAGATGATCAACCAACCATACCGAAAGCTGAGCCTCAGCCACCAA
AGAAGCCGCGGATGAGCACGGGGTTCTCTGAGGTGTTTGCGTTCAGCGGG
CCGGCACCGGAGAGGATAAACGGGAGGCTTGCGATGATTGGGTTCGTGGC
TGCATTGGGGGTGGAGATATCCAAGGGTCAGGATGTGTTTGCCCCAGTTA
TCAAACGGTGGGGTTGCCTGGTTCTTGGGGACCAGTGTTTTTGCTCACGG
TTGCGTCCCTGGTTCCTTTTGTTTAAAGGGGTCACCGTGGAATTCAAATC
GGAAGGGTTCATAGATTTCCGATGCTAAAGTTATAGAATGGGAAAGGTTG
ATATGCTGGGACCTTGTTTACATTTGGCTTTACAACAAAGTTTGGTTAGG
GGGGGCCCCCTAGGTTAACATTAAATATGGATAATAACCAAAAAAAAACG
ATAATTTTTATAGCAAATAAATAGAATGAAAAACCCATGGAGACATAAAT
TACTATATTCATCTGGCACAAAAAATAATAAAAAGAGGAAAAAAAAAAAA
AAAAAACGTAAAAAAGCACGGAGCCGGGCTAAAAAAGAAGTACACGCTAA
TAATAATCAAAGGACATAGACCACAAGACTATTAAGATAATCGCATAAAC
AAT
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