EY684327

Overview
NameEY684327
Unique NameEY684327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 4.586e-20
Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEKKRGIPVDVGGEPGHALRNCR-FTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            +S Y +   +P  F    R  K  + +  PV+   +P  A R+      L S  + G  TL ++F  +  +  +K LLGTR++++ E EV  NG+ F+K+ L +Y WL+Y   F    NF +GL  LG K +  +AIF +T A+W +A
Sbjct:   30 ISLYTILTYIPFYFFSESRQEKSNRIKAKPVN--SKPDSAYRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIA 175          

HSP 2 Score: 29.261 bits (64), Expect = 4.586e-20
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF  N  +VT+YA+LGG + V
Sbjct:  173 MIAAQACFMYNFQLVTLYATLGGPAIV 199          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 4.586e-20
Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEKKRGIPVDVGGEPGHALRNCR-FTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            +S Y +   +P  F    R  K  + +  PV+   +P  A R+      L S  + G  TL ++F  +  +  +K LLGTR++++ E EV  NG+ F+K+ L +Y WL+Y   F    NF +GL  LG K +  +AIF +T A+W +A
Sbjct:   30 ISLYTILTYIPFYFFSESRQEKSNRIKAKPVN--SKPDSAYRSVNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDVFVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIA 175          

HSP 2 Score: 29.261 bits (64), Expect = 4.586e-20
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF  N  +VT+YA+LGG + V
Sbjct:  173 MIAAQACFMYNFQLVTLYATLGGPAIV 199          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.009e-19
Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEKKRGIPVD-VGGEPGHALRNCR-FTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            +S Y +   +P  F   L  SK+EK   I    V  +P  A R+      L S  + G  TL ++F  +  +  DK LLGTR++++ E E+  NG+ F+K+ L  Y WL+Y   F    +F +GL  LG K +  +AIF +T A+W +A
Sbjct:   30 ISLYTILTYIPFYF---LCESKQEKPNHIKAKPVSSKPDSAYRSVNSMDGLASVLYPGCDTLDKVFMYAKNKFKDKRLLGTREILNEEDEIQPNGKVFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIA 175          

HSP 2 Score: 29.261 bits (64), Expect = 1.009e-19
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF  N  +VT+YA+LGG + V
Sbjct:  173 MIAAQACFMYNFQLVTLYATLGGPAIV 199          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.886e-19
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEK---KRGIPVDVGGEPGHALRNC-RFTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            ++ Y   + +P  F   L N+KK+    KR        +PG   R+   F SL      G  TL +LF+ +  + G K  LGTR+++S E E+  NG+ F+KL L  Y+W+ Y +    V NF SGL  LG K +  +AIF +T A+W +A
Sbjct:   19 ITIYSALIFIPWYF---LTNAKKKNAMAKRIKAKPTSDKPGSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVSKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWMNYLEVNRRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIA 166          

HSP 2 Score: 28.1054 bits (61), Expect = 2.886e-19
Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF+ N  +VT+YA+LG E+ V
Sbjct:  164 MIAAQTCFKYNFPLVTLYATLGKEAVV 190          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.879e-19
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEKKRGIPVD-VGGEPGHALRNCRFTS-LVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            +S Y +   +P  F   L  SK+EK   I    V  +P  A R+      L S  + G  TL ++F  +  +  +K LLGTR++++ E E+  NG+ F+K+ L  Y WL+Y   F    +F +GL  LG K +  +AIF +T A+W +A
Sbjct:   30 ISLYTILTYIPFYF---LCESKQEKPNQIKAKPVSSKPDSAYRSINSVDGLASVLYPGCDTLDKVFMYAKNKFKNKRLLGTREILNEEDEIQPNGKIFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANIAIFCETRAEWMIA 175          

HSP 2 Score: 29.261 bits (64), Expect = 4.879e-19
Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF  N  +VT+YA+LGG + V
Sbjct:  173 MIAAQACFMYNFQLVTLYATLGGPAIV 199          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.073e-18
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 3
Query:   84 MSAYIVGVLVPLVFTLLLRNSKKEK---KRGIPVDVGGEPGHALRNC-RFTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            ++ Y   + +P  F   L N+KK+    KR        +PG   R+   F SL      G  TL +LF+ +  + G K  LGTR+++S E E+  NG+ F+KL L  Y+W+ Y +    V NF SGL  LG K +  +AIF +T A+W +A
Sbjct:   19 ITIYSALIFIPWYF---LTNAKKKNAMAKRIKAKPTSDKPGSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVAKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIA 166          

HSP 2 Score: 28.1054 bits (61), Expect = 1.073e-18
Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF+ N  +VT+YA+LG E+ V
Sbjct:  164 MIAAQTCFKYNFPLVTLYATLGREAVV 190          
BLAST of EY684327 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.141e-17
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  189 EPGHALRNC-RFTSLVSTSWEGISTLAELFEQSCKEHGDKYLLGTRQLISRETEVADNGRSFEKLHL*EYEWLTYGQAFETVCNFASGLAHLGHKKEERVAIFADTEAKWFVA 524
            +PG   R+   F SL      G  TL +LF+ +  + G K  LGTR+++S E E+  NG+ F+KL L  Y+W+ Y +    V NF SGL  LG K +  +AIF +T A+W +A
Sbjct:   13 KPGSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVAKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIA 125          

HSP 2 Score: 28.1054 bits (61), Expect = 1.141e-17
Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  517 LLHLQGCFQRNVTVVTIYASLGGESNV 597
            ++  Q CF+ N  +VT+YA+LG E+ V
Sbjct:  123 MIAAQTCFKYNFPLVTLYATLGKEAVV 149          
The following BLAST results are available for this feature:
BLAST of EY684327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACSL3_PONAB4.586e-2033.78Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
ACSL3_HUMAN4.586e-2033.78Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACSL3_RAT1.009e-1934.90Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
ACSL4_HUMAN2.886e-1935.76Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapien... [more]
ACSL3_MOUSE4.879e-1934.23Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL4_MOUSE1.073e-1835.76Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]
ACSL4_RAT1.141e-1739.82Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norv... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-G06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684327 ID=EY684327; Name=EY684327; organism=Citrus sinensis; type=EST; length=882bp
AATTTGTTTCTCTAGAACTCAGTATTGATTTGGTAGATTCCGCTGGGGGG
CCATACCATACCATACCATACCATCCTTGAAAGATGAGTGCTTATATTGT
TGGTGTTCTTGTTCCCCTCGTGTTTACTCTTCTTCTTCGGAATTCAAAGA
AGGAAAAGAAACGGGGGATTCCGGTTGATGTTGGTGGGGAACCGGGGCAT
GCGCTTAGAAACTGTCGGTTTACTTCCTTAGTGAGCACATCCTGGGAAGG
CATCTCTACTCTTGCAGAACTTTTTGAGCAGTCTTGCAAGGAGCATGGAG
ATAAATACTTGCTTGGAACCCGGCAGTTGATTTCAAGGGAGACTGAAGTC
GCTGATAATGGAAGGTCCTTTGAGAAACTTCATTTATGAGAGTACGAGTG
GCTAACCTATGGTCAGGCGTTTGAAACAGTCTGCAACTTTGCTTCTGGCT
TAGCTCACCTTGGGCACAAGAAAGAGGAACGAGTAGCAATTTTCGCTGAT
ACCGAAGCGAAATGGTTTGTTGCATTTGCAGGGTTGCTTCCAACGCAATG
TTACGGTGGTGACCATATATGCATCCTTAGGGGGAGAAAGCAATGTGGCT
ATTTCCTTTGAATGAATTTAACAAAATGGTCCCTGGAAAAACACTTCTTT
TGGTAAGTGGCAAATTCTGGCAAAAAAAATCCTGGTGATGCTAAACTTTC
CGGTTTTCCCTAAAGTTGGATTTTATAATGGAAAAAAAGGGGAAATAACC
TGGTTTGCCCAGGGGGGATATGGATAGCCCCACGAGCAGGGCTTTAACCC
CAAGTTTTCTTCAAGTCATGAAACATTTTGTTCTCTGGACCTCGGGAGAA
CAAGGGAGGTTTTTTTTTTGGGATTACCCCCC
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