EY684321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684321 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 16 KLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPES----------------------------VTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSF 483 K SSP P A+ WF+D +L +D+FV+ ++ IK KG+R DLIG+ I HYASKWLP L +DA G T+ E ++ +A ++R VE+++ I PP++DS+ C F LRLLR A M+ PA ELEKR+ QL+QA+L +L+IPS+ Sbjct: 255 KESSPSRQAVP------PADWWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLT-KDAPLGATHDEPWAQASAAGVGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSY 431
BLAST of EY684321 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 79 WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDA-----------------------------------------------NKGLTNFEESPESVTA----SWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFNH 489 WF+D IL +D+FV+ I+ IK KG+R +L+G++I HYA KWLP L E + G TN + + A S +R VE+L+ I+PP+KDS+ C+F LRLLR ANM+ V PA ELEKR+ Q +QA+L++L+IP +N+ Sbjct: 251 WFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNN 438
BLAST of EY684321 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 48/145 (33.10%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 55 PTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFNH 489 P + W ++ CILD+D+F +S +K +GV+P + S I Y K L DL + + +G+ + + ++ + ++R V+++V +LP +K P NF LLR A ++ + ELEKRIS L+ S+ +L+IPSF + Sbjct: 181 PCRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLVRDHSGRGV-KYSDPGDNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTY 324
BLAST of EY684321 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16 Identity = 47/159 (29.56%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 31 DSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESP--ESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFNHTCGT 501 + ++ +P S++ W++DA +L F + I+ ++++G+R D+I + +Y K LP L + +P S +++ +E + +L +K +P FF+ +LR A ++ P LEKRI QLDQA+L++L++PSF+HT T Sbjct: 200 NGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRRRGGPESSGRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMET 358
BLAST of EY684321 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13 Identity = 45/141 (31.91%), Postives = 75/141 (53.19%), Query Frame = 1 Query: 79 WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFNHTCGT 501 W +D +L +D + + ++ +K +GVRP+ IG+ + YA + LT E +++ VET+V +LP E +P +F LLR A +++ + R +LE+R+ QLD A+L +L+IPSF H T Sbjct: 221 WIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAER------------ELTKRSEHEQTI----------VETIVTLLPVENLVVPISFLFGLLRRAVILDTSVSCRLDLERRLGSQLDMATLDDLLIPSFRHAGDT 339 The following BLAST results are available for this feature:
BLAST of EY684321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684321 ID=EY684321; Name=EY684321; organism=Citrus sinensis; type=EST; length=905bpback to top |