EY684317

Overview
NameEY684317
Unique NameEY684317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CSD2B_XENLA (CDGSH iron sulfur domain-containing protein 2-B OS=Xenopus laevis GN=cisd2-B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CSD2A_XENLA (CDGSH iron sulfur domain-containing protein 2-A OS=Xenopus laevis GN=cisd2-A PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD2_XENTR (CDGSH iron sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD2_MOUSE (CDGSH iron sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD2_HUMAN (CDGSH iron sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD2_BOVIN (CDGSH iron sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 3
Query:   66 AYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   97 AYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD1_BOVIN (CDGSH iron sulfur domain-containing protein 1 OS=Bos taurus GN=CISD1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 3
Query:   69 YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            YCRCWRS  FPLCDGSH KHN+ TGDNVGPL++KK+
Sbjct:   69 YCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKKK 104          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD1_RAT (CDGSH iron sulfur domain-containing protein 1 OS=Rattus norvegicus GN=Cisd1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 3
Query:   69 YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            YCRCWRS  FP CDG+H+KHN+ TGDNVGPL++KK+
Sbjct:   71 YCRCWRSKKFPFCDGAHIKHNEETGDNVGPLIIKKK 106          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD1_MOUSE (CDGSH iron sulfur domain-containing protein 1 OS=Mus musculus GN=Cisd1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 3
Query:   69 YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            YCRCWRS  FP CDG+H+KHN+ TGDNVGPL++KK+
Sbjct:   71 YCRCWRSKKFPFCDGAHIKHNEETGDNVGPLIIKKK 106          
BLAST of EY684317 vs. ExPASy Swiss-Prot
Match: CISD1_HUMAN (CDGSH iron sulfur domain-containing protein 1 OS=Homo sapiens GN=CISD1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.021e-11
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 3
Query:   69 YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 176
            YCRCWRS  FP CDG+H KHN+ TGDNVGPL++KK+
Sbjct:   71 YCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106          
The following BLAST results are available for this feature:
BLAST of EY684317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CSD2B_XENLA3.174e-1381.08CDGSH iron sulfur domain-containing protein 2-B OS... [more]
CSD2A_XENLA3.174e-1381.08CDGSH iron sulfur domain-containing protein 2-A OS... [more]
CISD2_XENTR3.174e-1381.08CDGSH iron sulfur domain-containing protein 2 OS=X... [more]
CISD2_MOUSE5.415e-1381.08CDGSH iron sulfur domain-containing protein 2 OS=M... [more]
CISD2_HUMAN5.415e-1381.08CDGSH iron sulfur domain-containing protein 2 OS=H... [more]
CISD2_BOVIN5.415e-1381.08CDGSH iron sulfur domain-containing protein 2 OS=B... [more]
CISD1_BOVIN1.575e-1277.78CDGSH iron sulfur domain-containing protein 1 OS=B... [more]
CISD1_RAT4.584e-1272.22CDGSH iron sulfur domain-containing protein 1 OS=R... [more]
CISD1_MOUSE4.584e-1272.22CDGSH iron sulfur domain-containing protein 1 OS=M... [more]
CISD1_HUMAN1.021e-1172.22CDGSH iron sulfur domain-containing protein 1 OS=H... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-F05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684317 ID=EY684317; Name=EY684317; organism=Citrus sinensis; type=EST; length=489bp
GATCCGGGGTCCGGGAATTTCCGGGTCGACCACGCGTCCGAACCGAGCTC
TCCAAGCCCCTCACCGCGTATTGCAGATGCTGGAGGTCAGGGACGTTCCC
CCTGTGCGATGGAAGCCACGTAAAGCACAACAAAGCTACTGGGGATAATG
TTGGGCCTTTGCTGTTGAAAAAGCAGTGATTATGTTATGTATTTTCATTT
TCCCTTGGTGCCATTTGTTCCTGAACTTGAGAACTGAAACACTTTTGAGA
GTTGATTGCATGAATAATGAGTTTTCTGTCATTAGTTGACCAAAACTTTG
GTCGCAATAGAATGCTAGGAATAATAGCCTAGGCGATGTTAGATTAAAGA
GAGAAACAGTATTGGGCCTTGGGTATTGTTGGGCCTTTCAACAATTAACC
AAGAATGCTGGTGCTTGTTGTAAATCGCGATGGATTTCATCAAAATAATG
CTCTCCCATTGTCTTCTTTAAAAAAAAAAAAAAAAAAAA
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