EY684311

Overview
NameEY684311
Unique NameEY684311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 3.203e-65
Identity = 128/177 (72.32%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPKTD-----KDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVEAEKPT*EMAT*KN 550
            KQF  S AKLIIT + YVD+L   D     +DF V+T+D PPENCLHF+VLSEA+E  +PEV I PDD VA+PFSSGTTGLPKGV+LTHKSL TSVAQQVDGENPNLYLT  DV+LCVLPLFHI+SLNSVLLC+LRAG+ VLLMQKFEIG LLELIQRHRVSV    P   +A  KN
Sbjct:  133 KQFTVSKAKLIITQAMYVDKLRNHDGAKLGEDFKVVTVDDPPENCLHFSVLSEANESDVPEVEIHPDDAVAMPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKN 309          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.762e-55
Identity = 120/175 (68.57%), Postives = 136/175 (77.71%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPKTDKDFTVITIDAP-PENCLHFTVLSEADEDQIPE--VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVEAEKPT*EMAT*KN 550
            KQ ++SGAKLIIT SQYVD+L    ++ T+IT D P PENCL F+ L   DE    +  V I  DD  ALPFSSGTTGLPKGVVLTHKSLITSVAQQVDG+NPNLYL + DV+LCVLPLFHIYSLNSVLL SLR+GA VLLM KFEIGALL+LIQRHRV++ A  P   +A  KN
Sbjct:  141 KQLKSSGAKLIITHSQYVDKLKNLGENLTLITTDEPTPENCLPFSTLITDDETNPFQETVDIGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGDNPNLYLKSNDVILCVLPLFHIYSLNSVLLNSLRSGATVLLMHKFEIGALLDLIQRHRVTIAALVPPLVIALAKN 315          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.402e-54
Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPKT--DKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AK+I+T + +V+++     + D  +I ID+ PE CLHF+VL++A+E  IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYSLNSVLLC LR GA +L+MQKF+I + LELIQR++V++
Sbjct:  118 KQAKASSAKIIVTQACHVNKVKDYAFENDVKIICIDSAPEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTI 277          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.649e-53
Identity = 114/188 (60.64%), Postives = 138/188 (73.40%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPKT------------DKDFTVITID---APPENCLHF-TVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVEAEKPT*EMAT*KN 550
            KQF+ SG KLI+T S YVD+L +             D   TVITID   A PE CL F  ++++ADE  +PEVAI PDDPVALPFSSGTTGLPKGVVLTH+S+++ VAQQVDGENPNL++  GDV LCVLPLFHI+SLNSVLLC++RAGA V LM +FE+GA+L  I+R RV+V A  P   +A  KN
Sbjct:  134 KQFKASGVKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDDDEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAIERWRVTVAAVVPPLVLALAKN 321          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.813e-53
Identity = 101/160 (63.12%), Postives = 130/160 (81.25%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AK+IIT S +V ++    ++ D  VI ID+ PE CLHF+ L+++DE +IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNS+LLC LR GA +L+MQKF+I   LELIQ+++VS+
Sbjct:  123 KQAKASSAKIIITQSCFVGKVKDYASENDVKVICIDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSI 282          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.184e-53
Identity = 104/160 (65.00%), Postives = 128/160 (80.00%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPKTDK-DFTVITID-APPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + +GA++I+T++ YV++L      D  VITID AP E C H +VL+EADE Q P V I PDD VALP+SSGTTGLPKGV+LTHK L++SVAQQVDGENPNLY  + DV+LCVLPLFHIYSLNSVLLC+LRAGA  L+MQKF +   LELIQ+++V+V
Sbjct:  118 KQAKAAGARIIVTLAAYVEKLADLQSHDVLVITIDDAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTV 277          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.182e-51
Identity = 98/160 (61.25%), Postives = 129/160 (80.62%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AKLIIT + YVD++     +K+  +I ID  P++CLHF+ L EADE ++PEV I+ DD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYSLN+VL C LRAG  +L+MQKF+I   LELIQ+++V++
Sbjct:  119 KQLKASLAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVIDSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTI 278          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.182e-51
Identity = 98/160 (61.25%), Postives = 128/160 (80.00%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AKLIIT + YVD++     +K+  +I ID  P++CLHF+ L EADE ++PEV I  DD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYSLN+VL C LRAG  +L+MQKF+I   LELIQ+++V++
Sbjct:  119 KQLKASQAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVINSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTI 278          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.491e-51
Identity = 95/160 (59.38%), Postives = 127/160 (79.38%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AK++IT + +  ++     + D  VI +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I   LELI +H+V++
Sbjct:  121 KQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSAPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTI 280          
BLAST of EY684311 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.865e-51
Identity = 95/160 (59.38%), Postives = 127/160 (79.38%), Query Frame = 2
Query:   35 KQFRTSGAKLIITMSQYVDRLPK--TDKDFTVITIDAPPENCLHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSV 508
            KQ + S AK++IT + +  ++     + D  VI +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I   LELI +H+V++
Sbjct:  121 KQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTI 280          
The following BLAST results are available for this feature:
BLAST of EY684311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
4CL2_SOYBN3.203e-6572.324-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2[more]
4CL3_ARATH1.762e-5568.574-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ... [more]
4CL2_TOBAC7.402e-5463.754-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=... [more]
4CL2_ORYSJ1.649e-5360.64Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa... [more]
4CL1_TOBAC2.813e-5363.134-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]
4CL_PINTA8.184e-5365.004-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2... [more]
4CL2_PETCR1.182e-5161.254-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]
4CL1_PETCR1.182e-5161.254-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]
4CL2_SOLTU4.491e-5159.384-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL1_SOLTU5.865e-5159.384-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-E10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684311 ID=EY684311; Name=EY684311; organism=Citrus sinensis; type=EST; length=925bp
CCCGGGAATTCCCCGGGGTCGAACCACGCGTCCGAAACAGTTCAGAACCT
CTGGCGCCAAATTGATTATCACAATGTCTCAGTACGTCGACAGGTTGCCG
AAGACGGACAAAGATTTCACAGTGATCACGATCGATGCCCCTCCGGAGAA
TTGCCTGCATTTCACAGTGTTATCGGAAGCAGATGAGGATCAAATCCCAG
AAGTTGCCATCGAGCCCGACGATCCTGTGGCGTTGCCCTTCTCTTCGGGC
ACCACGGGATTGCCTAAAGGAGTGGTGCTGACGCACAAGAGCTTGATCAC
CAGCGTGGCGCAGCAAGTGGACGGAGAGAACCCGAATCTTTACTTGACAA
ACGGAGACGTTGTGCTGTGTGTTTTGCCTTTGTTTCACATTTATTCGTTG
AACAGCGTGCTTCTGTGCTCGTTGAGAGCTGGGGCTGGGGTTCTGTTGAT
GCAGAAATTTGAGATAGGGGCGCTGCTGGAGCTGATACAGCGGCACAGGG
TGTCGGTGGAGGCTGAGAAGCCGACCTAGGAGATGGCGACATGAAAGAAC
CTGATTGGGCAAGGAAAATAACGAGACAAAGATAAAGAATGGGGNTNNTT
TNNTTNNNNTNTTATTTAAATATATACTTCAAATTCCCACCATACAAACA
TCAAATAATCCATATTTAAATCCACAACTAAAACTATCCTCTATCAAATC
ACAATATAATCACCACATATTATACCTCCCAAATTACTCATTTCTCTATC
ATATCATTTCTTACACTTCATCCATACCATCTTTATCTATAATAATATAA
ATACTACCACAAAAATACTTAAATTTACACTATACATCCACTATCTCCAC
AAAGCAGAGATACAGATCACATAGGCAGCAAGACTAGATGAGGAATAGAG
TTAACACGGAGGATATAAGAAATGC
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