EY684307

Overview
NameEY684307
Unique NameEY684307
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.452e-70
Identity = 128/168 (76.19%), Postives = 142/168 (84.52%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQKEFQ 504
            LILAILFS P+YW+VGLNP+ MAF HF        YTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFIS H IP YWIFMHYISLFKYPFE FLINEFS S+KCL+Y FGKC+V  ED+L+E  Y EES WRN+VIM+ F+L+YRFISYVILR RCSQ+ F+
Sbjct:  478 LILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLINEFSKSNKCLEYGFGKCLVTEEDLLKEERYGEESRWRNVVIMLCFVLLYRFISYVILRCRCSQRSFK 645          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.122e-38
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRC 486
            LI+++LF+ P+YW+VGL   L  F +F          +NS V CFSALVPNFI+G SVISG+MGSFFLFSGYFI+K  IP YW FMHY+SLFKYPFE  +INE+                +G+  L++   +E   W NL IM  FI+ YR + + IL +RC
Sbjct:  440 LIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLMINEY----------------RGDVFLKQQDLKESQKWSNLGIMASFIVGYRVLGFFILWYRC 585          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.340e-36
Identity = 72/164 (43.90%), Postives = 112/164 (68.29%), Query Frame = 1
Query:    4 ILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEF-SDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQ 492
            ++++LFS+P+YWIVGLNP++ AF  F          A+S+V+  SA+ P+FI GNS+I  V+G+FFLFSGYFI K  IP  W+FM+Y+SL++YP E  ++NE+ S  ++C       C++ GEDVL+E G ++++ W N+ IM+ F + YR + + IL  + S+
Sbjct:  458 VVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKPWMFMYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDKDTRWINVGIMLAFFVFYRILCWGILLRKASK 621          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.963e-32
Identity = 65/167 (38.92%), Postives = 108/167 (64.67%), Query Frame = 1
Query:    4 ILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSD-SDKCLQYIFGK----CVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCS 489
            +++I++SV +Y+++GL P   AF +F          ANS V+  S+L PN+I G S+++ ++ +FFLFSGYFISK  +P YW+FM++ S++KY  +  LINE+S  + KCL ++       C+V G DVL++ G  E+  W N+ +++GF ++YR + ++ L  R S
Sbjct:  419 VISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEKQRWFNVYVLLGFFVLYRVLCFLALLRRVS 585          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.611e-31
Identity = 67/168 (39.88%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSD-SDKCLQYI----FGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCS 489
            L++AI++SV LY++VGL  +  A  +F          ANS V+  S+L PN+I G S ++ ++ +FFLFSGYFISK  +P YW+FM++ S++KY  +  LINE+S   +KCL +        C+V G DVL + G  E   W N+ +++GF ++YR + +++L  R S
Sbjct:  406 LLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHERQRWFNVYMLLGFFVLYRVLCFLVLLKRVS 573          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.139e-25
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKC---------------------------------LQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVIL 474
            + L++ F+V  +W VGL   LM F  +        ++ +S V   S +VP+ ++G +++  ++  F LFSG+FI++  IP YWI+ HY+SL KYP+E  L NEFSD  +C                                 ++     C+  G DVL++ G  + S W  L+I VGF  ++R + Y+ L
Sbjct:  537 IFLSLAFAVTTFWAVGLEGGLMGFLFYCLIILASFWSGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPQYWIWFHYLSLVKYPYEAVLQNEFSDPTECFVRGVQLFDNSPLGELTYGMKLRLLDSVSRSIGMRISSSTCLTTGADVLKQQGVTQLSKWNCLLITVGFGFLFRILFYLCL 727          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.577e-24
Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCL---QYIFGK------------------------------CVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVIL 474
            + L++ F+   YW VGL+  L     +        ++ +S V   S +VP+ ++G +++  ++  F LFSG+FI+++ IPDYWI+ HY+SL KYP+E  L NEFSD+ KC      IF                                C+  G D+LR+ G  + S W  L I V F   +R + Y  L
Sbjct:  541 IFLSVAFAATTYWAVGLDGGLTGLLFYCLIILASFWSGSSFVTFLSGVVPSVMLGYTIVVAILAYFLLFSGFFINRNRIPDYWIWFHYMSLVKYPYEAVLQNEFSDATKCFVRGVQIFDNTPLGELPEVMKLKLLGTVSKSLGVTISSTTCLTTGSDILRQQGVVQLSKWNCLFITVAFGFFFRILFYFTL 731          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.280e-22
Identity = 55/191 (28.80%), Postives = 91/191 (47.64%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKC---------------------------------LQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVIL 474
            +IL++ F+   +W VGL+  LM F  +        +  +S V   S +VP+ ++G +++  ++  F LFSG+FI++  IP YWI+ HYISL KYP+E  L+NEF D  KC                                 ++     C+  G D+L++ G  + + W  L + V +   +R + Y  L
Sbjct:  528 IILSLAFAAITFWGVGLDGGLMGFLFYFLVILASFWAGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYISLVKYPYEAVLLNEFGDPTKCFVRGVQIFDNTPLVAVPQGMKVRLLATMSKSLGMRITSSTCLTTGYDILQQQGVTDLTKWNCLWVTVAWGFFFRILFYFSL 718          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.626e-21
Identity = 58/191 (30.37%), Postives = 90/191 (47.12%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKC------------------------LQYIFG---------KCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVIL 474
            ++L+  F+   +W VGL+     FF F        +  +S V   S ++PN ++G +V+  ++  F LFSG+FIS+  IP YW++ HYISL KYP+E  L NEF +  +C                        L+ + G          CV  G D+L++ G  + S W  L I V +   +R + Y  L
Sbjct:  556 IVLSASFAATTFWAVGLDGGANGFFFFYFTILASFWAGSSFVTFLSGVIPNVMLGFTVVVAILAYFLLFSGFFISRDRIPVYWLWFHYISLVKYPYEGVLQNEFQNPTRCFARGVQLFDNSPLGEFPNDVKVNLLKSMSGVLGTNVTAETCVTTGIDILKQQGITDISKWNCLWITVAWGFFFRVLFYFTL 746          
BLAST of EY684307 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.800e-20
Identity = 59/198 (29.80%), Postives = 91/198 (45.96%), Query Frame = 1
Query:    1 LILAILFSVPLYWIVGLNPNLMAFFHFXXXXXXXXYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKC------------------------LQYIFGK---------CVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQK 495
            L L+I F+   +W VGL+  L +FF++        ++ +S+V   S L+PN ++   V    +    L  G++I++  IP YWI+ HYISL KYP+E  LINEF D  +C                        L  + G          C+  G D+L + G  + S W  L I + + L +R + Y+ L F    K
Sbjct:  509 LALSIAFAATTFWTVGLSGGLESFFYYCLIIYAAFWSGSSIVTFISGLIPNVMMSYMVTIAYLSYCLLLGGFYINRDRIPLYWIWFHYISLLKYPYEAVLINEFDDPSRCFVKGVQVFDGTLLAEVSHVMKVKLLDTLSGSLGTKITESTCLRTGPDLLMQQGITQLSKWDCLWITLAWGLFFRILFYLSLLFGSKNK 706          
The following BLAST results are available for this feature:
BLAST of EY684307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AB5G_ARATH1.452e-7076.19ABC transporter G family member 5 OS=Arabidopsis t... [more]
AB10G_ARATH1.122e-3849.38ABC transporter G family member 10 OS=Arabidopsis ... [more]
AB23G_ARATH2.340e-3643.90ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB8G_ARATH5.963e-3238.92ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB4G_ARATH8.611e-3139.88ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB16G_ARATH4.139e-2530.89ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB1G_ARATH4.577e-2431.41ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB6G_ARATH3.280e-2228.80ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB2G_ARATH3.626e-2130.37ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB18G_ARATH1.800e-2029.80ABC transporter G family member 18 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684307 ID=EY684307; Name=EY684307; organism=Citrus sinensis; type=EST; length=906bp
CTCATCTTGGCAATTTTATTCTCAGTTCCTTTATACTGGATTGTGGGGCT
AAACCCAAATCTCATGGCATTTTTCCACTTCTTGTTGCTGATTTGGTTGA
TTCTCTACACAGCAAATTCAGTTGTGGTTTGTTTCAGTGCTTTGGTGCCA
AACTTCATTGTTGGGAACTCAGTGATTTCGGGCGTAATGGGTTCATTCTT
TTTGTTCTCTGGATACTTCATATCAAAGCATGGAATCCCAGACTATTGGA
TTTTTATGCATTATATCTCATTGTTTAAGTACCCATTTGAACAGTTTCTG
ATAAATGAGTTCTCAGATTCGGACAAGTGCTTGCAGTATATATTTGGGAA
ATGCGTGGTGAAAGGAGAAGATGTGCTGAGAGAAGCAGGTTATGAAGAGG
AGAGCAGTTGGCGAAACTTGGTGATAATGGTTGGTTTTATTTTGATTTAC
AGGTTTATTTCTTACGTTATTCTTAGATTTAGATGCTCTCAGAAGGAGTT
TCAGAAAAGCTCTTGTGTGAAAAAAATGATGACACTGAAACTCCCTTTTT
TTCTCAATTTTCTTTCCCTCTCTCACGAGAATTTAACAAAATGGTTCACA
TGTTTTGGAATTTTAACTCAAGATAACCCCAAAAAAAAAAAAACAAAAGT
TTTTAAAAAATTAAAGAATGGTAATATCCACCCAATATTGGTATTATTTT
TTCCCCAAAAAAAGAAAAAAAGAATCCAAACTTTTTTCCCGAGTTTTAGA
AGAAAAGAAAAAAAACATAAAACAAAAAATCAGAATAAAAAACGAAATGA
ATAACACATGAAAAATAAAAAAAAAAAAAAAATATGGGGGGGGGGGGCCC
CCCACAAGAAATACAAGAGTTTAATATAAACCATGGGAGTGAGAGAAATC
AAAAAT
back to top