EY684292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2) HSP 1 Score: 252.292 bits (643), Expect = 2.590e-66 Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRNA 437 DGRYGLV+CTDSAVYAEGPARPTGGAAA+AMLIGPDAPI FESKLR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK+ C KFEK+EG++FS+ D DY VFHSPYNKLVQKSFARL +NDFLRNA Sbjct: 137 DGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDADYIVFHSPYNKLVQKSFARLLYNDFLRNA 270
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45 Identity = 85/133 (63.91%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRN 434 DGR +VV D AVY +GPARPTGGA VAMLIGP+API FES LRG HM + YDFYKP++ SEYP VDGKLS +CY A+D+CY + + FEK G+ FS+ VD+ +FHSPYNKLVQKSF R+ +NDFL N Sbjct: 139 DGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLRGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVDFALFHSPYNKLVQKSFGRMLYNDFLNN 271
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.081e-43 Identity = 85/136 (62.50%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFL 428 DGRY LVVC D AVY G ARPTGGA AVAML+GP+AP+ E LRG+HM + YDFYKP++ SEYP+VDGKLS CYL ALD CY ++ QK EK R F++ DV Y +FH+P+ KLVQKS ARL FNDFL Sbjct: 186 DGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEKQWKQAGIDRPFTLDDVQYMIFHTPFCKLVQKSLARLMFNDFL 321
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 8.963e-43 Identity = 85/139 (61.15%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRNA 437 DGRY LVVC D AVY G ARPTGGA AVAMLIGP AP+ E LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY + +K + + F++ DV Y +FH+P+ K+VQKS ARL FNDFL ++ Sbjct: 186 DGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSS 324
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42 Identity = 84/136 (61.76%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFL 428 DGRY +VVC D AVY G ARPTGGA AVAMLIGP AP+A E LRG+HM + YDFYKPNLASEYP+VDGKLS CYL ALD CY + +K + R F++ D+ Y +FH+P+ K+VQKS ARL FNDFL Sbjct: 186 DGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFL 321
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42 Identity = 84/138 (60.87%), Postives = 101/138 (73.19%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRN 434 DGRY LVV D AVYA G ARPTGG AVA+LIGP+AP+ FE LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY +C+K + EG + F++ D + +FHSPY KLVQKS AR+ NDFL + Sbjct: 149 DGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLND 286
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42 Identity = 84/138 (60.87%), Postives = 101/138 (73.19%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRN 434 DGRY LVV D AVYA G ARPTGG AVA+LIGP+AP+ FE LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY +C+K + EG + F++ D + +FHSPY KLVQKS AR+ NDFL + Sbjct: 149 DGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLND 286
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42 Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLR 431 DGRY LVV D AVYA+G ARPTGGA AVAML+G +AP+ F+ +R SHM HAYDFYKP+L+S YP VDGKLS CYL ALD CY+ +C K +K G +F + +D +FH+PY KLVQKS ARL NDF+R Sbjct: 136 DGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERLDAVLFHAPYCKLVQKSLARLVLNDFVR 267
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.997e-42 Identity = 83/134 (61.94%), Postives = 101/134 (75.37%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-EGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRN 434 DGRY LVV D AVY++G ARPTGGA V MLIGP+A + F+ LRG+HM + DFYKP+L+SEYP VDGKLS CYL ALD CY + +KFE + + +FSM DY FHSPYN+LVQKS+ARL +NDFL+N Sbjct: 139 DGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSFDYVCFHSPYNRLVQKSYARLIYNDFLQN 272
BLAST of EY684292 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.406e-42 Identity = 84/139 (60.43%), Postives = 100/139 (71.94%), Query Frame = 3 Query: 36 DGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EGRQFSMMDVDYFVFHSPYNKLVQKSFARLFFNDFLRNA 437 DGRY LVVC D AVY G RPTGGA AVAMLIGP AP+ E LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY + +K + + F++ DV Y +FH+P+ K+VQKS ARL FNDFL ++ Sbjct: 186 DGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSS 324 The following BLAST results are available for this feature:
BLAST of EY684292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684292 ID=EY684292; Name=EY684292; organism=Citrus sinensis; type=EST; length=860bpback to top |